RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ANKZF1Q9H8Y5 726 aa10.62□□□□□ -0.71
USP35-201ENST00000526425 UBE2TQ9NPD8 197 aaPredicted RBP10.62□□□□□ -0.71
USP35-201ENST00000526425 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
USP35-201ENST00000526425 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
USP35-201ENST00000526425 CEP72Q9P209 647 aa10.62□□□□□ -0.71
USP35-201ENST00000526425 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
USP35-201ENST00000526425 SMIM23A6NLE4 172 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 WDR46O15213 610 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP35-201ENST00000526425 SSTR3P32745 418 aaPredicted RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 GJA8P48165 433 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 SMTNP53814 917 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 GUCY2DQ02846 1103 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 FAM84AQ96KN4 292 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 PPP1R16BQ96T49 567 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 RABL2BQ9UNT1 228 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 ZNF711Q9Y462 761 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 FZD9O00144 591 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 H2AFZP0C0S5 128 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 ZNF280AP59817 542 aaPredicted RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 LRRC55Q6ZSA7 311 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 H2AFVQ71UI9 128 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 DPH6Q7L8W6 267 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 TRPM4Q8TD43 1214 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 POMGNT1Q8WZA1 660 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 ATP6V0A4Q9HBG4 840 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 PLAGL2Q9UPG8 496 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 LRRIQ4A6NIV6 560 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 EIF3HO15372 352 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP35-201ENST00000526425 EVI5O60447 810 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 KLRC1P26715 233 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 NOVP48745 357 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 C9orf131Q5VYM1 1079 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 MSL3Q8N5Y2 521 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 LBHD1Q9BQE6 289 aaPredicted RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 NACA2Q9H009 215 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 BRD8Q9H0E9 1235 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 METTL14Q9HCE5 456 aaKnown RBP10.61□□□□□ -0.71
USP35-201ENST00000526425 KCNMB3Q9NPA1 279 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 ANKFY1Q9P2R3 1169 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 GINS2Q9Y248 185 aa10.61□□□□□ -0.71
USP35-201ENST00000526425 HNRNPDLO14979 420 aaKnown RBP10.6□□□□□ -0.71
USP35-201ENST00000526425 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 UCHL3P15374 230 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 DESP17661 470 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 MARK3P27448 753 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 PTGER2P43116 358 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 SLC12A3P55017 1021 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
USP35-201ENST00000526425 TAF11Q15544 211 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 CFAP221Q4G0U5 840 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 CWF19L1Q69YN2 538 aaKnown RBP10.6□□□□□ -0.71
USP35-201ENST00000526425 ZNF280CQ8ND82 737 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 MRGBPQ9NV56 204 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 GALNT8Q9NY28 637 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 SLITRK3O94933 977 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 IMPDH2P12268 514 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 GAP43P17677 238 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 TNNI1P19237 187 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 SWSAP1Q6NVH7 229 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 MIS18BP1Q6P0N0 1132 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 ETNPPLQ8TBG4 499 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 GABBR1Q9UBS5 961 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 PTK2Q05397 1052 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 MIPOL1Q8TD10 442 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.6□□□□□ -0.719e-6■■■■■ 27.7
USP35-201ENST00000526425 SYT17Q9BSW7 474 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 SYNPO2Q9UMS6 1093 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 LTBP3Q9NS15 1303 aa10.6□□□□□ -0.71
USP35-201ENST00000526425 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
USP35-201ENST00000526425 KCNMA1Q12791 1236 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 DRAP1Q14919 205 aaPredicted RBP10.59□□□□□ -0.71
USP35-201ENST00000526425 FAM47EQ6ZV65 393 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 FUKQ8N0W3 1084 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 MTMR8Q96EF0 704 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 LRRC1Q9BTT6 524 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 SELENOOQ9BVL4 669 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 CCDC113Q9H0I3 377 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 SIK3Q9Y2K2 1263 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 LRRC37AA6NMS7 1700 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 EDIL3O43854 480 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 RNF8O76064 485 aa10.59□□□□□ -0.71
USP35-201ENST00000526425 SYF2O95926 243 aaKnown RBP10.59□□□□□ -0.71
USP35-201ENST00000526425 MCM3P25205 808 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms