RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ZSCAN31Q96LW9 406 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 AIFM3Q96NN9 605 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 KIF2CQ99661 725 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 SLKQ9H2G2 1235 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 MAN1C1Q9NR34 630 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 KANSL3Q9P2N6 904 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 WRAP73Q9P2S5 460 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 FBXL21Q9UKT6 434 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 VAV3Q9UKW4 847 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 DUSP12Q9UNI6 340 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 PATJQ8NI35 1801 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 CPLX1O14810 134 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 NARSO43776 548 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 CDKL5O76039 1030 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 SOD2P04179 222 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 URODP06132 367 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 MYBP10242 640 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 OR1G1P47890 313 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 LAMTOR4Q0VGL1 99 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 TAS1R1Q7RTX1 841 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 CCDC105Q8IYK2 499 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 SIX5Q8N196 739 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 PSPC1Q8WXF1 523 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 RPS6KC1Q96S38 1066 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 DHX33Q9H6R0 707 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 SH2B1Q9NRF2 756 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 MARCH5Q9NX47 278 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 PRG3Q9Y2Y8 225 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 NOTCH4Q99466 2003 aa10.68□□□□□ -0.7
TRAPPC4-206ENST00000525303 CCDC195A0A1B0GUA6 201 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 TEX28O15482 410 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 RFPL2O75678 378 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 ERLIN2O94905 339 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 P4HBP07237 508 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 ADH1AP07327 375 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 CFHP08603 1231 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 ITGA4P13612 1032 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 NCLP19338 710 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 MLH1P40692 756 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 RFC5P40937 340 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 FOXK2Q01167 660 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 STK3Q13188 491 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 EMC2Q15006 297 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 ANGPT1Q15389 498 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 GALNT17Q6IS24 598 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 KRT25Q7Z3Z0 450 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 FERMT3Q86UX7 667 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 EXOC8Q8IYI6 725 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 COLGALT2Q8IYK4 626 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 DTWD2Q8NBA8 298 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 RNF149Q8NC42 400 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 SMG8Q8ND04 991 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 RSAD2Q8WXG1 361 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 RTP3Q9BQQ7 232 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 LXNQ9BS40 222 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 HERC2P3Q9BVR0 1158 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 EIF2AQ9BY44 585 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 WDR6Q9NNW5 1121 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 UBN1Q9NPG3 1134 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 SSX2IPQ9Y2D8 614 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 IPPQ9Y573 584 aa10.67□□□□□ -0.7
TRAPPC4-206ENST00000525303 CLUHO75153 1309 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 CCDC194A0A1B0GVG4 234 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 ARL5CA6NH57 179 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 F8W810 466 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 STK25O00506 426 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 ZBTB39O15060 712 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 INPPL1O15357 1258 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 CCNT1O60563 726 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 TSPAN1O60635 241 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 PFKFB2O60825 505 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 GLUD1P00367 558 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 SPATA31D3P0C874 917 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 GLUD2P49448 558 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 NCAPH2Q6IBW4 605 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 PPP4R3AQ6IN85 833 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 SPATA31D4Q6ZUB0 917 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 NEK8Q86SG6 692 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 C4orf19Q8IY42 314 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 RNF168Q8IYW5 571 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 CNNM3Q8NE01 707 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 CMASQ8NFW8 434 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 TCP11Q8WWU5 503 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 STAMQ92783 540 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 HAS1Q92839 578 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 CPB2Q96IY4 423 aa10.66□□□□□ -0.7
TRAPPC4-206ENST00000525303 B3GALT6Q96L58 329 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms