RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 HABP4Q5JVS0 413 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 WAPLQ7Z5K2 1190 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 MOGAT3Q86VF5 341 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 TCP11L2Q8N4U5 519 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 NKAIN3Q8N8D7 197 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 C3orf20Q8ND61 904 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 ADAMTS18Q8TE60 1221 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 RRP36Q96EU6 259 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 BRIP1Q9BX63 1249 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 MARCH2Q9P0N8 246 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 CNTNAP4Q9C0A0 1308 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 A0A1W2PPH5 198 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 LRRC14BA6NHZ5 514 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 HNRNPDLO14979 420 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 BUB1BO60566 1050 aaPredicted RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 INMTO95050 263 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PAPLNO95428 1278 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 BCRP11274 1271 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 GLULP15104 373 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 FGFR2P21802 821 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SDHAP31040 664 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 GJA4P35212 333 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 STAT1P42224 750 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 AFMP43652 599 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PAPOLAP51003 745 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 HK3P52790 923 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 DRG2P55039 364 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 DCAF7P61962 342 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 ROR1Q01973 937 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PPARAQ07869 468 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SEPT2Q15019 361 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SLC14A2Q15849 920 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 ADRM1Q16186 407 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 TTC38Q5R3I4 469 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PRAMEF9Q5VWM5 478 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 BTBD8Q5XKL5 378 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 FAM205BPQ63HN1 556 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 HAUS3Q68CZ6 603 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SLCO4C1Q6ZQN7 724 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 CCDC129Q6ZRS4 1044 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 BEND5Q7L4P6 421 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 HEATR3Q7Z4Q2 680 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 FTSJ3Q8IY81 847 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 ANKRD52Q8NB46 1076 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 FANCBQ8NB91 859 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SIMC1Q8NDZ2 872 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 OR14C36Q8NHC7 312 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 ATRIPQ8WXE1 791 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 HTRA1Q92743 480 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 DPF3Q92784 378 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 HVCN1Q96D96 273 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 IQCDQ96DY2 449 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SUCLG2Q96I99 432 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PKNOX2Q96KN3 472 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 TREX2Q9BQ50 279 aaPredicted RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 YIPF2Q9BWQ6 316 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 CCDC68Q9H2F9 335 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 ACSS3Q9H6R3 686 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 ZCCHC17Q9NP64 241 aaKnown RBP6.22□□□□□ -1.41
USP47-204ENST00000525078 SERHLQ9NQF3 203 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 SACM1LQ9NTJ5 587 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 MYO1AQ9UBC5 1043 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 TCFL5Q9UL49 500 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
USP47-204ENST00000525078 A0A087X0M5 115 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 A0A1B0GX30 115 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 AQP12BA6NM10 295 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 C22orf46C9J442 243 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 MYO1FO00160 1098 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 PODXLO00592 558 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 AHCYL1O43865 530 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 SLC3A2P08195 630 aaKnown RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 NFICP08651 508 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 EPXP11678 715 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 MYL4P12829 197 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 AKR1B1P15121 316 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 ALOX15P16050 662 aaPredicted RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 WASP42768 502 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 NR1H2P55055 460 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 NKX6-1P78426 367 aaPredicted RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 TLE2Q04725 743 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 CDK5R2Q13319 367 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 PLS1Q14651 629 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 MEA1Q16626 185 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 TRAPPC3LQ5T215 181 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 XP32Q5T750 250 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 ANKRD34AQ69YU3 496 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 CYP4F22Q6NT55 531 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 CYP2R1Q6VVX0 501 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 KCTD1Q719H9 257 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 SVOPQ8N4V2 548 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 DTWD1Q8N5C7 304 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 HIPK4Q8NE63 616 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 OR10H5Q8NGA6 315 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms