RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 NPTXRO95502 500 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 NAMPTP43490 491 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 HES2Q9Y543 173 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 POMCP01189 267 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 CDC25AP30304 524 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 COASYQ13057 564 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 KCNC3Q14003 757 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 KCNK18Q7Z418 384 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 DDX53Q86TM3 631 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 HACE1Q8IYU2 909 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 DEPTORQ8TB45 409 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 FAM193BQ96PV7 902 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 GAD1Q99259 594 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 PRKCBP05771 671 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZP2Q05996 745 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 HYIQ5T013 277 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 IFT74Q96LB3 600 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 TRIM6Q9C030 488 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
TRAPPC4-204ENST00000524797 SPTBN5Q9NRC6 3674 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ARL5CA6NH57 179 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 N4BP3O15049 544 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 CLASP2O75122 1294 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 CXCL14O95715 111 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 EDN1P05305 212 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 MLH1P40692 756 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 SCNN1GP51170 649 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 MAPK6Q16659 721 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 BRAPQ7Z569 592 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ADHFE1Q8IWW8 467 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 COLGALT2Q8IYK4 626 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 GJD3Q8N144 294 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 VPS52Q8N1B4 723 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 KHSRPQ92945 711 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 PLXNA3P51805 1871 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ACKR2O00590 384 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 SRGAP2BP0DMP2 458 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 CTSAP10619 480 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 LIG1P18858 919 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 AKAP5P24588 427 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 LLGL2Q6P1M3 1020 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 SMRP1Q8NCR6 262 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 AUTS2Q8WXX7 1259 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 KIFC3Q9BVG8 833 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 MARCH5Q9NX47 278 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 USP20Q9Y2K6 914 aa12.33□□□□□ -0.44
TRAPPC4-204ENST00000524797 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 NRP1O14786 923 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 HIP1RO75146 1068 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 ALDH2P05091 517 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 CA8P35219 290 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 EFNA5P52803 228 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 DSC1Q08554 894 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 MAPK7Q13164 816 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 BMS1Q14692 1282 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 TMEM119Q4V9L6 283 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms