RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 DVL3Q92997 716 aaPredicted RBP7.45□□□□□ -1.22
SKP1-213ENST00000524288 C8orf49Q96NF6 230 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 MAP3K14Q99558 947 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 PITHD1Q9GZP4 211 aaPredicted RBP7.45□□□□□ -1.22
SKP1-213ENST00000524288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.45□□□□□ -1.22
SKP1-213ENST00000524288 PPP4R1LQ9P1A2 415 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 ADAM29Q9UKF5 820 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 KLHL18O94889 574 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 NEK3P51956 506 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 SLC16A1P53985 500 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 ANTXR2P58335 489 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
SKP1-213ENST00000524288 ADRM1Q16186 407 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 COBLL1Q53SF7 1204 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 KANK2Q63ZY3 851 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 USP45Q70EL2 814 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 CAMKK1Q8N5S9 505 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 MVB12AQ96EY5 273 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 DNAI1Q9UI46 699 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 INTUQ9ULD6 942 aa7.44□□□□□ -1.22
SKP1-213ENST00000524288 A0A0A6YYJ9 748 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 NPEPPSL1A6NEC2 478 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 APAF1O14727 1248 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 KNG1P01042 644 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
SKP1-213ENST00000524288 MGAT5Q09328 741 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 HDAC1Q13547 482 aaPredicted RBP7.43□□□□□ -1.22
SKP1-213ENST00000524288 BRD3Q15059 726 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 WDR72Q3MJ13 1102 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 ATAT1Q5SQI0 421 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 SLFN13Q68D06 897 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 CIR1Q86X95 450 aaPredicted RBP7.43□□□□□ -1.22
SKP1-213ENST00000524288 REXO1L1PQ8IX06 675 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 RIN2Q8WYP3 895 aaPredicted RBP7.43□□□□□ -1.22
SKP1-213ENST00000524288 KAT5Q92993 513 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 HIST1H2AHQ96KK5 128 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 HIST1H2AJQ99878 128 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 FDXACB1Q9BRP7 624 aaPredicted RBP7.43□□□□□ -1.22
SKP1-213ENST00000524288 SARGQ9BW04 601 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 C1orf112Q9NSG2 853 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 KCMF1Q9P0J7 381 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 CDC42EP3Q9UKI2 254 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 RIPOR2Q9Y4F9 1068 aa7.43□□□□□ -1.22
SKP1-213ENST00000524288 HTRA2O43464 458 aaPredicted RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 TRIM27P14373 513 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 XPAP23025 273 aaPredicted RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 EDNRBP24530 442 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 PURAQ00577 322 aaKnown RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 MALLQ13021 153 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 IL10RAQ13651 578 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 Q6ZUG5 572 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 OTOP2Q7RTS6 562 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 LIMS2Q7Z4I7 341 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 RALYLQ86SE5 291 aaKnown RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 GLB1L3Q8NCI6 653 aaPredicted RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 RAB24Q969Q5 203 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 AJUBAQ96IF1 538 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 CDK5RAP1Q96SZ6 601 aaKnown RBP7.42□□□□□ -1.22
SKP1-213ENST00000524288 KCND1Q9NSA2 647 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 SYNPO2Q9UMS6 1093 aa7.42□□□□□ -1.22
SKP1-213ENST00000524288 A0A0A6YYK5 440 aaPredicted RBP7.41□□□□□ -1.22
SKP1-213ENST00000524288 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
SKP1-213ENST00000524288 USP14P54578 494 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 NOMO1Q15155 1222 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 PGS1Q32NB8 556 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 MUM1L1Q5H9M0 696 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 GRAMD4Q6IC98 578 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 OVCH2Q7RTZ1 564 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 CERS3Q8IU89 383 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 EXOC8Q8IYI6 725 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 NUDT10Q8NFP7 164 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 DNERQ8NFT8 737 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 PJA1Q8NG27 643 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 OR2I1PQ8NGU4 316 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 FATE1Q969F0 183 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 NUDT11Q96G61 164 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 DYDC2Q96IM9 177 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 SOX7Q9BT81 388 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 ADI1Q9BV57 179 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 SEC61A2Q9H9S3 476 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 JADE2Q9NQC1 790 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 MAN1C1Q9NR34 630 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 USP25Q9UHP3 1055 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 ZDHHC9Q9Y397 364 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 IPPQ9Y573 584 aa7.41□□□□□ -1.22
SKP1-213ENST00000524288 B4GALT4O60513 344 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 DTNBO60941 627 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 ALDH2P05091 517 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 MYL3P08590 195 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 STAT5BP51692 787 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 STILQ15468 1287 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 DGKDQ16760 1214 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 ANO4Q32M45 955 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 LMBR1LQ6UX01 489 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 BTNL9Q6UXG8 535 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 BMP8AQ7Z5Y6 402 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 PARD3BQ8TEW8 1205 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 RSAD2Q8WXG1 361 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms