RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TCEA3O75764 348 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.655e-8■□□□□ 11.3
SPIDR-225ENST00000524141 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 COMTP21964 271 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MAN1A1P33908 653 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 COL16A1Q07092 1604 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 CETN1Q12798 172 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ANKRD20A2Q5SQ80 823 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ANKRD20A1Q5TYW2 823 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ANKRD20A3Q5VUR7 823 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 EP400NLQ6ZTU2 488 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 SYDE1Q6ZW31 735 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 PALB2Q86YC2 1186 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 FITM2Q8N6M3 262 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MAGEB18Q96M61 343 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 TGS1Q96RS0 853 aaKnown RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 LRRC19Q9H756 370 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 PARVGQ9HBI0 331 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 KCNK9Q9NPC2 374 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 GGT7Q9UJ14 662 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 STK38LQ9Y2H1 464 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 UNC5CO95185 931 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ACSL3O95573 720 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ITIH2P19823 946 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 STX2P32856 288 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MARCKSL1P49006 195 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 CAV1Q03135 178 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 STRN3Q13033 797 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 NFIXQ14938 502 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 UBAP2Q5T6F2 1119 aaKnown RBP11.01□□□□□ -0.65
SPIDR-225ENST00000524141 RINT1Q6NUQ1 792 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ERICH1Q86X53 443 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 CLEC10AQ8IUN9 316 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 TEX9Q8N6V9 391 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 CD101Q93033 1021 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 LENG9Q96B70 501 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 DMAC2Q9NW81 257 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 NKIRAS1Q9NYS0 192 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ADAM22Q9P0K1 906 aa11.01□□□□□ -0.65
SPIDR-225ENST00000524141 ADGRA3Q8IWK6 1321 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 GREB1LQ9C091 1923 aaPredicted RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 TMEM110-MUSTN1A8MSY1 372 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 E7ENQ6 273 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 FOXN3O00409 490 aaPredicted RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 MEIS2O14770 477 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 SPOPO43791 374 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 LRRN2O75325 713 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 SREBF1P36956 1147 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 CYP4A11Q02928 519 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 BFSP1Q12934 665 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 BLMHQ13867 455 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 MESDQ14696 234 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 MTFR1Q15390 333 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 ZDHHC14Q8IZN3 488 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 KIF2BQ8N4N8 673 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 ANKRD42Q8N9B4 389 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 PRCCQ92733 491 aaPredicted RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 SAAL1Q96ER3 474 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 EIF2AK1Q9BQI3 630 aaKnown RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 ACTL7BQ9Y614 415 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 HIP1RO75146 1068 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 TTC4O95801 387 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 PYGMP11217 842 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 GZMAP12544 262 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 BRAFP15056 766 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 CYP2J2P51589 502 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 RWDD2BP57060 319 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 PARP6Q2NL67 630 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 CDCA2Q69YH5 1023 aaPredicted RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 NAIF1Q69YI7 327 aaPredicted RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 PHLDB3Q6NSJ2 640 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 RNF207Q6ZRF8 634 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 CEP120Q8N960 986 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 MAIP1Q8WWC4 291 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 SNF8Q96H20 258 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 DDX23Q9BUQ8 820 aaKnown RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 AGPAT3Q9NRZ7 376 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 SPATS2LQ9NUQ6 558 aaKnown RBP11□□□□□ -0.65
SPIDR-225ENST00000524141 VAV3Q9UKW4 847 aa11□□□□□ -0.65
SPIDR-225ENST00000524141 ANKRD63C9JTQ0 380 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 UFL1O94874 794 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 TRIM49P0CI25 452 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 TRIM49CP0CI26 452 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 NMT1P30419 496 aaKnown RBP10.99□□□□□ -0.65
SPIDR-225ENST00000524141 CIITAP33076 1130 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 PICALMQ13492 652 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 MYBPC2Q14324 1141 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 SETDB1Q15047 1291 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 SIX1Q15475 284 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-225ENST00000524141 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
SPIDR-225ENST00000524141 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
SPIDR-225ENST00000524141 SLC9A9Q8IVB4 645 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms