RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TNNT3	P45378	269 aa	Predicted RBP	11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	TM4SF4	P48230	202 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	GCLM	P48507	274 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	MFAP3	P55082	362 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CCNA1	P78396	465 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CBX1	P83916	185 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	SNAPC2	Q13487	334 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	TMEM132A	Q24JP5	1023 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CFAP221	Q4G0U5	840 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CBWD6	Q4V339	395 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CBWD3	Q5JTY5	395 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CBWD5	Q5RIA9	395 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	ALKBH5	Q6P6C2	394 aa	Known RBP	11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	ABHD15	Q6UXT9	468 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	GPD1L	Q8N335	351 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	MSANTD4	Q8NCY6	345 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	TMEM161B	Q8NDZ6	487 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	CCDC127	Q96BQ5	260 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	OPTN	Q96CV9	577 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	SAAL1	Q96ER3	474 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	BORCS6	Q96GS4	357 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	NT5C1B	Q96P26	610 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	FNBP1	Q96RU3	617 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	OSBPL9	Q96SU4	736 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	KIFC3	Q9BVG8	833 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	SELENOO	Q9BVL4	669 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	MROH8	Q9H579	483 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	C1orf112	Q9NSG2	853 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	BTBD7	Q9P203	1132 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	RNF14	Q9UBS8	474 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	PPME1	Q9Y570	386 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	DUSP10	Q9Y6W6	482 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	ANK1	P16157	1881 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	IRF6	O14896	467 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	ZNF862	O60290	1169 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	SRGAP2	O75044	1071 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	GGPS1	O95749	300 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	TGFB3	P10600	412 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	GTF2H1	P32780	548 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	NAMPT	P43490	491 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	DNA2	P51530	1060 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	C2orf54	Q08AI8	447 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	MKRN3	Q13064	507 aa	Known RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	RPS6KA1	Q15418	735 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	BRDT	Q58F21	947 aa	Predicted RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	KRT39	Q6A163	491 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	SLFN12L	Q6IEE8	588 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	NFRKB	Q6P4R8	1299 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	GJB7	Q6PEY0	223 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	ZBTB8OS	Q8IWT0	167 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	TMC2	Q8TDI7	906 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	TMEM174	Q8WUU8	243 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	TCP11	Q8WWU5	503 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	RUBCN	Q92622	972 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	GLG1	Q92896	1179 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	CLMN	Q96JQ2	1002 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	JPH2	Q9BR39	696 aa	Predicted RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	TMEM8A	Q9HCN3	771 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	PCDH10	Q9P2E7	1040 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006	NAGPA	Q9UK23	515 aa		11.65	□□□□□ -0.54
SPIDR-222	ENST00000524006		A0A0A6YYK5	440 aa	Predicted RBP	11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	TARSL2	A2RTX5	802 aa	Known RBP	11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	GRID2IP	A4D2P6	1211 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	ZNF233	A6NK53	670 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	TMCO5B	A8MYB1	307 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	TISP43	B9A030	160 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	GAS2	O43903	313 aa	Known RBP	11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	FTCD	O95954	541 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	PNMA6A	P0CW24	399 aa	Predicted RBP	11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	KLRC1	P26715	233 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	CNGA1	P29973	690 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	PIK3CA	P42336	1068 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	PDE6C	P51160	858 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	TNNC1	P63316	161 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	ENPEP	Q07075	957 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	WDR44	Q5JSH3	913 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	C8orf74	Q6P047	294 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	METTL7B	Q6UX53	244 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	HDX	Q7Z353	690 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	PEX26	Q7Z412	305 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	IRF2BP2	Q7Z5L9	587 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	PPM1K	Q8N3J5	372 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	CALR3	Q96L12	384 aa	Known RBP	11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	MMS19	Q96T76	1030 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	R3HDML	Q9H3Y0	253 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	KCNH4	Q9UQ05	1017 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	CIT	O14578	2027 aa		11.64	□□□□□ -0.55
SPIDR-222	ENST00000524006	NCAN	O14594	1321 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	SYNGAP1	Q96PV0	1343 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	LOC102724159	A0A0B4J2E5	919 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ASB14	A6NK59	587 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006		K7ERI5	159 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	GPR25	O00155	361 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	NCK2	O43639	380 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	EXTL3	O43909	919 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	RGS20	O76081	388 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms