RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GAP43P17677 238 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 LAG3P18627 525 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 CMA1P23946 247 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 CTNNB1P35222 781 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 GATMP50440 423 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
VEGFA-225ENST00000523950 CLLU1OSQ5K130 101 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 PDILTQ8N807 584 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 TMEM161BQ8NDZ6 487 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 URGCPQ8TCY9 931 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 DDX12PQ92771 950 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 C11orf84Q9BUA3 381 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-225ENST00000523950 LMAN2LQ9H0V9 348 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 PDZD7Q9H5P4 517 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 CERS4Q9HA82 394 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 RSAD1Q9HA92 442 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 KBTBD4Q9NVX7 518 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 TNFSF13BQ9Y275 285 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 IPPQ9Y573 584 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 MYMKA6NI61 221 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 H3BNC9 293 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 INPPL1O15357 1258 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-225ENST00000523950 OFD1O75665 1012 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-225ENST00000523950 NOMO2Q5JPE7 1267 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 CNNM4Q6P4Q7 775 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
VEGFA-225ENST00000523950 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 DHX58Q96C10 678 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
VEGFA-225ENST00000523950 PANK2Q9BZ23 570 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 ZHX3Q9H4I2 956 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 KCNH3Q9ULD8 1083 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
VEGFA-225ENST00000523950 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 EPOPA6NHQ4 379 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 K7ENM7 598 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 POLR2DO15514 142 aaKnown RBP13.79□□□□□ -0.2
VEGFA-225ENST00000523950 NPTXRO95502 500 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 LIG1P18858 919 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 GPM6BQ13491 265 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 ALCAMQ13740 583 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 PTPROQ16827 1216 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
VEGFA-225ENST00000523950 NT5DC1Q5TFE4 455 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 DYMQ7RTS9 669 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 HAUS6Q7Z4H7 955 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 SPRED2Q7Z698 418 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 LPPQ93052 612 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 DNAJC19Q96DA6 116 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
VEGFA-225ENST00000523950 CWH43Q9H720 699 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 OLFML3Q9NRN5 406 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
VEGFA-225ENST00000523950 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
VEGFA-225ENST00000523950 TDRD15B5MCY1 1934 aaKnown RBP13.79□□□□□ -0.2
VEGFA-225ENST00000523950 MYO9BQ13459 2157 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 LPXNO60711 386 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 TOM1L1O75674 476 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 PIGRP01833 764 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 EDN1P05305 212 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 PROZP22891 400 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 PPM1AP35813 382 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 GTF2BQ00403 316 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 UBE3AQ05086 875 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 CEP57L1Q8IYX8 460 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 GDPD5Q8WTR4 605 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
VEGFA-225ENST00000523950 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 TBX20Q9UMR3 447 aa13.78□□□□□ -0.2
VEGFA-225ENST00000523950 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MYL1P05976 194 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MCF2P10911 925 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 PFKFB1P16118 471 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 IGFBP4P22692 258 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms