RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 KRT34O76011 436 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PLGP00747 810 aaPredicted RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 HEXBP07686 556 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GLI1P08151 1106 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8HP0CJ92 632 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CALM1P0DP23 149 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CALM2P0DP24 149 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CALM3P0DP25 149 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PDHBP11177 359 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ACTN1P12814 892 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 AKR1B1P15121 316 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 HDCP19113 662 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 FECHP22830 423 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 RFC4P35249 363 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 HSPA13P48723 471 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ARFIP1P53367 373 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 MTTPP55157 894 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ZNF445P59923 1031 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CYP4F2P78329 520 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CYP4F8P98187 520 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 HNRNPUQ00839 825 aaKnown RBP eCLIP7.01□□□□□ -1.29
SDC2-208ENST00000523877 EXOSC9Q06265 439 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 SULT2A1Q06520 285 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CYP4F3Q08477 520 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CDC16Q13042 620 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 TRIM14Q14142 442 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 DOC2AQ14183 400 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CASP8Q14790 479 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CNGA2Q16280 664 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PCSK7Q16549 785 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ATP13A4Q4VNC1 1196 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PABPC1LQ4VXU2 614 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 FAM209AQ5JX71 171 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GPATCH4Q5T3I0 446 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 SNX30Q5VWJ9 437 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GRAMD4Q6IC98 578 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 TTBK2Q6IQ55 1244 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ELMSAN1Q6PJG2 1045 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PADI6Q6TGC4 694 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 AGMOQ6ZNB7 445 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 BEND4Q6ZU67 534 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 FAM47EQ6ZV65 393 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 NUP54Q7Z3B4 507 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ZNF554Q86TJ5 538 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 SLC51BQ86UW2 128 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 SESTD1Q86VW0 696 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ST13P4Q8IZP2 240 aaPredicted RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 CEP112Q8N8E3 955 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 DNAAF3Q8N9W5 541 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ST13P5Q8NFI4 369 aaPredicted RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 IFI44Q8TCB0 444 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 FAM216AQ8WUB2 273 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 NXPE3Q969Y0 559 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CCDC42Q96M95 316 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CMTM3Q96MX0 182 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CAMKK2Q96RR4 588 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 SEC62Q99442 399 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 DDX50Q9BQ39 737 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 SELENOSQ9BQE4 189 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 KIAA1683Q9H0B3 1180 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 RAD21L1Q9H4I0 556 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CCDC177Q9NQR7 707 aaPredicted RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 GLRX2Q9NS18 164 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 TRPM5Q9NZQ8 1165 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ANAPC5Q9UJX4 755 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 VANGL2Q9ULK5 521 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PCDHB3Q9Y5E6 796 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 EMILIN1Q9Y6C2 1016 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PCF11O94913 1555 aaKnown RBP7□□□□□ -1.29
SDC2-208ENST00000523877 GLI2P10070 1586 aa7□□□□□ -1.29
SDC2-208ENST00000523877 hCG_1642624A0A1W2PR95 340 aa7□□□□□ -1.29
SDC2-208ENST00000523877 TRIM75PA6NK02 468 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ACOD1A6NK06 481 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CAPN14A8MX76 684 aa7□□□□□ -1.29
SDC2-208ENST00000523877 H3BQV1 296 aa7□□□□□ -1.29
SDC2-208ENST00000523877 THAP12O43422 761 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CRTAPO75718 401 aaPredicted RBP7□□□□□ -1.29
SDC2-208ENST00000523877 CHRNA1P02708 482 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ASGR1P07306 291 aa7□□□□□ -1.29
SDC2-208ENST00000523877 EIF2S2P20042 333 aaKnown RBP7□□□□□ -1.29
SDC2-208ENST00000523877 ALAS2P22557 587 aa7□□□□□ -1.29
SDC2-208ENST00000523877 MAPK3P27361 379 aaPredicted RBP7□□□□□ -1.29
SDC2-208ENST00000523877 GDI1P31150 447 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PPARGP37231 505 aaPredicted RBP7□□□□□ -1.29
SDC2-208ENST00000523877 ADCY8P40145 1251 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SLC26A5P58743 744 aa7□□□□□ -1.29
SDC2-208ENST00000523877 KLC1Q07866 573 aa7□□□□□ -1.29
SDC2-208ENST00000523877 NR5A1Q13285 461 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SPIDRQ14159 915 aa7□□□□□ -1.29
SDC2-208ENST00000523877 E2F2Q14209 437 aa7□□□□□ -1.29
SDC2-208ENST00000523877 TCEA2Q15560 299 aa7□□□□□ -1.29
SDC2-208ENST00000523877 NFIL3Q16649 462 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ZNF423Q2M1K9 1284 aa7□□□□□ -1.29
SDC2-208ENST00000523877 MINDY4Q4G0A6 757 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CYP27C1Q4G0S4 372 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
SDC2-208ENST00000523877 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PDPK2PQ6A1A2 396 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PM20D1Q6GTS8 502 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms