RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	PFDN4	Q9NQP4	134 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MOCS1	Q9NZB8	636 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	1e-6	■■□□□ 12.1
FAM49B-225	ENST00000523288	PKD2L1	Q9P0L9	805 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	KLHL3	Q9UH77	587 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ANGPTL2	Q9UKU9	493 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CAPN11	Q9UMQ6	739 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	C10orf71	Q711Q0	1435 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRIM64C	A6NLI5	447 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SUPT3H	O75486	399 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	AFP	P02771	609 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	GYPC	P04921	128 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PFKFB1	P16118	471 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PPARG	P37231	505 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	KCNJ2	P63252	427 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	GALNT1	Q10472	559 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TNFAIP1	Q13829	316 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM209A	Q5JX71	171 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TWF2	Q6IBS0	349 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF790	Q6PG37	636 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC30A10	Q6XR72	485 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CPLX4	Q7Z7G2	160 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	OR7G1	Q8NGA0	311 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	BRF1	Q92994	677 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MPP4	Q96JB8	637 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	IFT122	Q9HBG6	1241 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MTUS1	Q9ULD2	1270 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	GAK	O14976	1311 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF532	Q9HCE3	1301 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	KDM3A	Q9Y4C1	1321 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MACROD2	A1Z1Q3	448 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ESRRB	O95718	433 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	C8B	P07358	591 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MYCLP1	P12525	358 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	HMOX2	P30519	316 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RTP1	P59025	263 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GTF2I	P78347	998 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CDR2	Q01850	454 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DNAJC3	Q13217	504 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	IFIT1B	Q5T764	474 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	KAZN	Q674X7	775 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PHLDB3	Q6NSJ2	640 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DCLRE1A	Q6PJP8	1040 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NSMF	Q6X4W1	530 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	HEATR3	Q7Z4Q2	680 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ERI1	Q8IV48	349 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP6V0D2	Q8N8Y2	350 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASSF5	Q8WWW0	418 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MARVELD3	Q96A59	401 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	EGLN2	Q96KS0	407 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PRPF18	Q99633	342 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	LZTFL1	Q9NQ48	299 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	EMILIN3	Q9NT22	766 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TCP11L1	Q9NUJ3	509 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GNPTG	Q9UJJ9	305 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TOGARAM1	Q9Y4F4	1720 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF536	O15090	1300 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ARHGAP10	A1A4S6	786 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRIM64B	A6NI03	449 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CETN3	O15182	167 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPTLC2	O15270	562 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GSTT2	P0CG29	244 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GSTT2B	P0CG30	244 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CALM1	P0DP23	149 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CALM2	P0DP24	149 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CALM3	P0DP25	149 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTRB1	P17538	263 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CYLC1	P35663	651 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSD17B3	P37058	310 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAPRE2	Q15555	327 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DOK7	Q18PE1	504 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	COBLL1	Q53SF7	1204 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTRB2	Q6GPI1	263 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	AAGAB	Q6PD74	315 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	UNC5CL	Q8IV45	518 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TERB1	Q8NA31	727 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NSMCE3	Q96MG7	304 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CFAP57	Q96MR6	1250 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF184	Q99676	751 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM167B	Q9BTA0	163 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	LRRC1	Q9BTT6	524 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NLRC4	Q9NPP4	1024 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CNOT8	Q9UFF9	292 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAN1B1	Q9UKM7	699 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CDH7	Q9ULB5	785 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PCDHB6	Q9Y5E3	794 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ACTL7B	Q9Y614	415 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MET	P08581	1390 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms