RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	MIOS	Q9NXC5	875 aa		13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	KANSL3	Q9P2N6	904 aa		13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	LRWD1	Q9UFC0	647 aa		13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	RAPGEFL1	Q9UHV5	662 aa		13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	IRAK3	Q9Y616	596 aa		13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.72	□□□□□ -0.21
VEGFA-223	ENST00000523125	C2orf16	Q68DN1	1984 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	ARHGEF35	A5YM69	484 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	CARNS1	A5YM72	827 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	PP2D1	A8MPX8	630 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	GPR37L1	O60883	481 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	CLASP2	O75122	1294 aa	Known RBP	13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	POMC	P01189	267 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	CTSA	P10619	480 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	GJB2	P29033	226 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	PRPH	P41219	470 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	NCBP1	Q09161	790 aa	Known RBP	13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	HAUS3	Q68CZ6	603 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	ANKRD54	Q6NXT1	300 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	LLGL2	Q6P1M3	1020 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	PPP4R3CP	Q6ZMV5	832 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	GSTCD	Q8NEC7	633 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	ZFP42	Q96MM3	310 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	GAD1	Q99259	594 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	FZD8	Q9H461	694 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	NXF3	Q9H4D5	531 aa	Known RBP	13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	UPF2	Q9HAU5	1272 aa	Known RBP	13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	POLD4	Q9HCU8	107 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	UBN1	Q9NPG3	1134 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	KIAA1024	Q9UPX6	916 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	KIF3A	Q9Y496	699 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	MYO10	Q9HD67	2058 aa		13.71	□□□□□ -0.21
VEGFA-223	ENST00000523125	DENND4A	Q7Z401	1863 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	WDFY4	Q6ZS81	3184 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	FAM86C2P	A6NEL3	165 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	LAD1	O00515	517 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	NRP1	O14786	923 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	EFEMP2	O95967	443 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	ALDH2	P05091	517 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	EDN1	P05305	212 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	MLH1	P40692	756 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	DSC1	Q08554	894 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	FAM187B	Q17R55	369 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	TMEM31	Q5JXX7	168 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	MCTP1	Q6DN14	999 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	SLC27A1	Q6PCB7	646 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	COLGALT2	Q8IYK4	626 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	POP1	Q99575	1024 aa	Known RBP	13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	TMEM175	Q9BSA9	504 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	MMTAG2	Q9BU76	263 aa	Known RBP	13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	CCDC113	Q9H0I3	377 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	BHMT2	Q9H2M3	363 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	DDX19A	Q9NUU7	478 aa	Known RBP	13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	HCFC2	Q9Y5Z7	792 aa		13.7	□□□□□ -0.22
VEGFA-223	ENST00000523125	LOC730098	B7Z3J9	87 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	DCX	O43602	365 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	LILRB3	O75022	631 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	NPTXR	O95502	500 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	ALAD	P13716	330 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	AKAP5	P24588	427 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	CDC25A	P30304	524 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	NAMPT	P43490	491 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	SCNN1G	P51170	649 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	RILPL1	Q5EBL4	403 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	RNF135	Q8IUD6	432 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	SNX29	Q8TEQ0	813 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	SLC22A17	Q8WUG5	538 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	PRIMPOL	Q96LW4	560 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	FAM193B	Q96PV7	902 aa	Predicted RBP	13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	APOL6	Q9BWW8	343 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	APOL5	Q9BWW9	433 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	MARCH5	Q9NX47	278 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	USP20	Q9Y2K6	914 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	FAN1	Q9Y2M0	1017 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	GIT1	Q9Y2X7	761 aa		13.69	□□□□□ -0.22
VEGFA-223	ENST00000523125	CIT	O14578	2027 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125		E9PMD0	336 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125		F8W810	466 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	SRGAP2B	P0DMP2	458 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	HOXB8	P17481	243 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	ATP2C1	P98194	919 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	CBX2	Q14781	532 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	PTPN14	Q15678	1187 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	DTHD1	Q6ZMT9	781 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	KCNK18	Q7Z418	384 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	ZBTB8OS	Q8IWT0	167 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	RNF168	Q8IYW5	571 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	CASP10	Q92851	521 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	PHF7	Q9BWX1	381 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	RAB34	Q9BZG1	259 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	TRIM6	Q9C030	488 aa	Predicted RBP	13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	C2orf40	Q9H1Z8	148 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	PDZD7	Q9H5P4	517 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	CDH22	Q9UJ99	828 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	STK24	Q9Y6E0	443 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	ZMYM2	Q9UBW7	1377 aa		13.68	□□□□□ -0.22
VEGFA-223	ENST00000523125	TECTA	O75443	2155 aa		13.68	□□□□□ -0.22

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