RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PRCPP42785 496 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 EFNA5P52803 228 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 TYRO3Q06418 890 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 KCNA1Q09470 495 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
PVT1-215ENST00000522963 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
PVT1-215ENST00000522963 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 ERVK-5Q9HDB9 667 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 TBX20Q9UMR3 447 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 MAPK8IP1Q9UQF2 711 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 PPP1R3GB7ZBB8 358 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 INO80B-WBP1J3KQ70 363 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 K7ERI5 159 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
PVT1-215ENST00000522963 EDN1P05305 212 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 PRKCBP05771 671 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 HOXD13P35453 343 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 ALCAMQ13740 583 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 STX1AQ16623 288 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 AMHR2Q16671 573 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
PVT1-215ENST00000522963 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 YME1L1Q96TA2 773 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 ADAM2Q99965 735 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 INO80BQ9C086 356 aaPredicted RBP13.09□□□□□ -0.31
PVT1-215ENST00000522963 IKZF4Q9H2S9 585 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 TTYH1Q9H313 450 aaPredicted RBP13.09□□□□□ -0.31
PVT1-215ENST00000522963 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 FZD8Q9H461 694 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
PVT1-215ENST00000522963 TTC3P53804 2025 aa13.08□□□□□ -0.31
PVT1-215ENST00000522963 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 MGEA5O60502 916 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 GJB5O95377 273 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 CCDC192P0DO97 292 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
PVT1-215ENST00000522963 SCP2P22307 547 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 MAPK6Q16659 721 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 FAM187BQ17R55 369 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 RTN4RL1Q86UN2 441 aaPredicted RBP13.08□□□□□ -0.32
PVT1-215ENST00000522963 MLKLQ8NB16 471 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 LINC01599Q8WXQ3 324 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 ACCSQ96QU6 501 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 RAD9AQ99638 391 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 LRFN2Q9ULH4 789 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 UBE4BO95155 1302 aa13.08□□□□□ -0.32
PVT1-215ENST00000522963 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 ACKR2O00590 384 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 B4GALT5O43286 388 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 TSPAN1O60635 241 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 KIF20AO95235 890 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 SFPQP23246 707 aaKnown RBP eCLIP13.07□□□□□ -0.326e-6■■□□□ 14.5
PVT1-215ENST00000522963 ABCD1P33897 745 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 STRN3Q13033 797 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 GRIN2CQ14957 1233 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 KNOP1Q1ED39 458 aaKnown RBP13.07□□□□□ -0.32
PVT1-215ENST00000522963 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 C11orf57Q6ZUT1 292 aaPredicted RBP13.07□□□□□ -0.32
PVT1-215ENST00000522963 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 RNF169Q8NCN4 708 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 TARS2Q9BW92 718 aaKnown RBP13.07□□□□□ -0.32
PVT1-215ENST00000522963 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
PVT1-215ENST00000522963 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 PRMT7Q9NVM4 692 aaPredicted RBP13.07□□□□□ -0.32
PVT1-215ENST00000522963 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
PVT1-215ENST00000522963 TISP43B9A030 160 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 TGFB1I1O43294 461 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 ERLIN2O94905 339 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 PIGRP01833 764 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 STAG3L1P0CL83 205 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 PPP1R2P41236 205 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 PMS1P54277 932 aaKnown RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 ZNF445P59923 1031 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms