RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
DENND3-217ENST00000521835 RASA3Q14644 834 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 NOP9Q86U38 636 aaKnown RBP13.1□□□□□ -0.31
DENND3-217ENST00000521835 NLRP14Q86W24 1093 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 CCDC50Q8IVM0 306 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 TAB3Q8N5C8 712 aaPredicted RBP13.1□□□□□ -0.31
DENND3-217ENST00000521835 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 PCDHB18PQ96TA0 734 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 ADAM33Q9BZ11 813 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
DENND3-217ENST00000521835 GGT7Q9UJ14 662 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
DENND3-217ENST00000521835 MYH11P35749 1972 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 SHOX2O60902 331 aaPredicted RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 CAND2O75155 1236 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 ACSL3O95573 720 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 QARSP47897 775 aaKnown RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 BIRC3Q13489 604 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CUL1Q13616 776 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 ZKSCAN8Q15776 578 aaPredicted RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 JAMLQ86YT9 394 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 TAS1R2Q8TE23 839 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 ACCSQ96QU6 501 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 PSMD1Q99460 953 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CLDN3O15551 220 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 RPS6KA5O75582 802 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 CAP2P40123 477 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 SETQ01105 290 aaPredicted RBP13.09□□□□□ -0.31
DENND3-217ENST00000521835 PTGISQ16647 500 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 FAM182AQ5T1J6 154 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 TMC3Q7Z5M5 1100 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CPLX4Q7Z7G2 160 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 CEP170P1Q96L14 293 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
DENND3-217ENST00000521835 GJB6O95452 261 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 MRPS9P82933 396 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 LRRC14Q15048 493 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 QPCTQ16769 361 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 TATDN2Q93075 761 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 HES6Q96HZ4 224 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 PWWP2AQ96N64 755 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 ANKFY1Q9P2R3 1169 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 PIK3CDO00329 1044 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 DDX3YO15523 660 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 PYGMP11217 842 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 MTM1Q13496 603 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 HP1BP3Q5SSJ5 553 aaPredicted RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 UBL4BQ8N7F7 174 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 KAT2BQ92831 832 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 ASIC3Q9UHC3 531 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 CCDC188H7C350 402 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 DENND2CQ68D51 928 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 CCDC137Q6PK04 289 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 KDM7AQ6ZMT4 941 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
DENND3-217ENST00000521835 SEMA4AQ9H3S1 761 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 GABBR1Q9UBS5 961 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 TMEM59LQ9UK28 342 aa13.08□□□□□ -0.32
DENND3-217ENST00000521835 LY75O60449 1722 aa13.07□□□□□ -0.32
DENND3-217ENST00000521835 TNNI1P19237 187 aa13.07□□□□□ -0.32
DENND3-217ENST00000521835 ACOT2P49753 483 aa13.07□□□□□ -0.32
DENND3-217ENST00000521835 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
DENND3-217ENST00000521835 MTERF2Q49AM1 385 aa13.07□□□□□ -0.32
DENND3-217ENST00000521835 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms