RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 MRPL42Q9Y6G3 142 aaKnown RBP11.31□□□□□ -0.6
TRIM35-204ENST00000521283 A0A0C4DFX4 3053 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 CUL9Q8IWT3 2517 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 DLL1O00548 723 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 WNT7AO00755 349 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 LINC00271P0C7V0 271 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 CYP11B2P19099 503 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-204ENST00000521283 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-204ENST00000521283 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 KRT17Q04695 432 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 PLA2G2CQ5R387 149 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-204ENST00000521283 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
TRIM35-204ENST00000521283 ZBTB8OSQ8IWT0 167 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 C17orf75Q9HAS0 396 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 FAM105AQ9NUU6 356 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 NCOR1O75376 2440 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 EYSQ5T1H1 3165 aa11.3□□□□□ -0.6
TRIM35-204ENST00000521283 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 MED24O75448 989 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 SCP2P22307 547 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 NAMPTP43490 491 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 ALDH7A1P49419 539 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 EFNA5P52803 228 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 PAN2Q504Q3 1202 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 FAM102BQ5T8I3 360 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 SNX21Q969T3 373 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 PABPC5Q96DU9 382 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 IPO9Q96P70 1041 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 CASD1Q96PB1 797 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-204ENST00000521283 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 KIAA1671Q9BY89 1806 aa11.29□□□□□ -0.6
TRIM35-204ENST00000521283 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 ZBTB39O15060 712 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 EYA4O95677 639 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 CAPSQ13938 189 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 GIT2Q14161 759 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 HYIQ5T013 277 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 COLGALT1Q8NBJ5 622 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 SPPL3Q8TCT6 385 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 CDK5RAP3Q96JB5 506 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 DRC1Q96MC2 740 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 POLR3FQ9H1D9 316 aaPredicted RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
TRIM35-204ENST00000521283 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 PCDHB2Q9Y5E7 798 aa11.28□□□□□ -0.6
TRIM35-204ENST00000521283 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.6
TRIM35-204ENST00000521283 GRM6O15303 877 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 FGF18O76093 207 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 ITGB1P05556 798 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 SRGAP2BP0DMP2 458 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 FGFR1P11362 822 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
TRIM35-204ENST00000521283 FGFR4P22455 802 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 GLRA2P23416 452 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
TRIM35-204ENST00000521283 ABCD1P33897 745 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 LONP1P36776 959 aaKnown RBP11.27□□□□□ -0.61
TRIM35-204ENST00000521283 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.61
TRIM35-204ENST00000521283 MBTD1Q05BQ5 628 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 MAPK6Q16659 721 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 NOMO2Q5JPE7 1267 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 CDCA2Q69YH5 1023 aaPredicted RBP11.27□□□□□ -0.61
TRIM35-204ENST00000521283 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 KCNT2Q6UVM3 1135 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 POF1BQ8WVV4 589 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
TRIM35-204ENST00000521283 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms