RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PDZD7Q9H5P4 517 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 NSUN3Q9H649 340 aaKnown RBP22.77■■□□□ 1.24
TRIM35-203ENST00000521253 C17orf75Q9HAS0 396 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 MYO7AQ13402 2215 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 CACNB1Q02641 598 aaPredicted RBP22.76■■□□□ 1.23
TRIM35-203ENST00000521253 TMEM132AQ24JP5 1023 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 GPBP1Q86WP2 473 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 URGCPQ8TCY9 931 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 APOL6Q9BWW8 343 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 UBN1Q9NPG3 1134 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 KMT5AQ9NQR1 393 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 ARHGAP28Q9P2N2 729 aa22.76■■□□□ 1.23
TRIM35-203ENST00000521253 K7ERI5 159 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 N4BP3O15049 544 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 SPTLC2O15270 562 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 ZC3H11AO75152 810 aaKnown RBP eCLIP22.75■■□□□ 1.23
TRIM35-203ENST00000521253 PLS3P13797 630 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 IRS1P35568 1242 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 UBE3AQ05086 875 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 NT5DC1Q5TFE4 455 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
TRIM35-203ENST00000521253 NRDE2Q9H7Z3 1164 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 CCDC39Q9UFE4 941 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 PHLPP2Q6ZVD8 1323 aa22.75■■□□□ 1.23
TRIM35-203ENST00000521253 SLC16A4O15374 487 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 B4GALT3O60512 393 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 YEATS4O95619 227 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 AKAP5P24588 427 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 DDIT3P35638 169 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 PPM1AP35813 382 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 TXLNAP40222 546 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 MLH1P40692 756 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 BCAR1P56945 870 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 PLCB3Q01970 1234 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 TFF2Q03403 129 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 RNASELQ05823 741 aaKnown RBP22.74■■□□□ 1.23
TRIM35-203ENST00000521253 TAS1R3Q7RTX0 852 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 ZNF280BQ86YH2 543 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 HACE1Q8IYU2 909 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 SLC39A11Q8N1S5 342 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 SPIRE2Q8WWL2 714 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 ATXN2LQ8WWM7 1075 aaKnown RBP22.74■■□□□ 1.23
TRIM35-203ENST00000521253 HLA-CQ95604 372 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 GAD1Q99259 594 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 REEP2Q9BRK0 252 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 NTPCRQ9BSD7 190 aaKnown RBP22.74■■□□□ 1.23
TRIM35-203ENST00000521253 GBP3Q9H0R5 595 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 TMEM134Q9H6X4 195 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 SPG21Q9NZD8 308 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 COG5Q9UP83 839 aa22.74■■□□□ 1.23
TRIM35-203ENST00000521253 RBM19Q9Y4C8 960 aaKnown RBP22.74■■□□□ 1.23
TRIM35-203ENST00000521253 ARL5CA6NH57 179 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 NT5C1B-RDH14C9J2C7 533 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 INPPL1O15357 1258 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 PPP6R2O75170 966 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 POMCP01189 267 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 ALDH7A1P49419 539 aaKnown RBP22.73■■□□□ 1.23
TRIM35-203ENST00000521253 ATF7IP2Q5U623 682 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 EEF1DP3Q658K8 133 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 MRPS27Q92552 414 aaKnown RBP22.73■■□□□ 1.23
TRIM35-203ENST00000521253 ZFP42Q96MM3 310 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 KANSL3Q9P2N6 904 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 DNAJB4Q9UDY4 337 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 STK17AQ9UEE5 414 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
TRIM35-203ENST00000521253 ODF2LQ9ULJ1 636 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 GIT1Q9Y2X7 761 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
TRIM35-203ENST00000521253 DDHD2O94830 711 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 RRAGBQ5VZM2 374 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 TMEM161BQ8NDZ6 487 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 ADPGKQ9BRR6 497 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 TLR9Q9NR96 1032 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 KCNG1Q9UIX4 513 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 LZTS1Q9Y250 596 aa22.72■■□□□ 1.23
TRIM35-203ENST00000521253 GALTP07902 379 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 SLC11A1P49279 550 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 SCNN1GP51170 649 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 SMTNP53814 917 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 ERVFC1P60507 584 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 MRPS5P82675 430 aaKnown RBP22.71■■□□□ 1.23
TRIM35-203ENST00000521253 KRT17Q04695 432 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 HYAL1Q12794 435 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 GIT2Q14161 759 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 TMEM173Q86WV6 379 aaPredicted RBP22.71■■□□□ 1.23
TRIM35-203ENST00000521253 PANK2Q9BZ23 570 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 MIOSQ9NXC5 875 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 LARSQ9P2J5 1176 aaKnown RBP22.71■■□□□ 1.23
TRIM35-203ENST00000521253 PARP2Q9UGN5 583 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 PUF60Q9UHX1 559 aaKnown RBP22.71■■□□□ 1.23
TRIM35-203ENST00000521253 ZDHHC9Q9Y397 364 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 BRWD1Q9NSI6 2320 aa22.71■■□□□ 1.23
TRIM35-203ENST00000521253 A0A087X0B3 334 aa22.7■■□□□ 1.22
TRIM35-203ENST00000521253 BRD1O95696 1058 aa22.7■■□□□ 1.22
TRIM35-203ENST00000521253 KRT18P05783 430 aaKnown RBP22.7■■□□□ 1.22
TRIM35-203ENST00000521253 MAPTP10636 758 aaKnown RBP22.7■■□□□ 1.22
TRIM35-203ENST00000521253 ZNF131P52739 623 aa22.7■■□□□ 1.22
TRIM35-203ENST00000521253 DNM1Q05193 864 aaKnown RBP22.7■■□□□ 1.22
TRIM35-203ENST00000521253 COL19A1Q14993 1142 aa22.7■■□□□ 1.22
TRIM35-203ENST00000521253 DCAF4L1Q3SXM0 396 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms