RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 FAM129AQ9BZQ8 928 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 IRF2BPLQ9H1B7 796 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 KRT82Q9NSB4 513 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 KBTBD4Q9NVX7 518 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 SAP30BPQ9UHR5 308 aaKnown RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 ITM2BQ9Y287 266 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 FADS3Q9Y5Q0 445 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 C9orf172C9J069 976 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 GLRX3O76003 335 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 DLGAP3O95886 979 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 APBA3O96018 575 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ITGA2BP08514 1039 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 POLR2EP19388 210 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 PAFAH1B1P43034 410 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 PIP4K2AP48426 406 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 NCALDP61601 193 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 HPCAP84074 193 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 NRG1Q02297 640 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 MCL1Q07820 350 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 BNIP1Q12981 228 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ZBTB17Q13105 803 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 CYLC2Q14093 348 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 CNPY1Q3B7I2 92 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 PARP10Q53GL7 1025 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 EXOSC6Q5RKV6 272 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ERMARDQ5T6L9 678 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 NEPROQ6NW34 567 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 LLGL2Q6P1M3 1020 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 TMEM53Q6P2H8 277 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 SHISA2Q6UWI4 295 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 NT5DC4Q86YG4 428 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 AGGF1Q8N302 714 aaeCLIP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 SH2D3CQ8N5H7 860 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 UBASH3BQ8TF42 649 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 MAP4K1Q92918 833 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 KLHL29Q96CT2 875 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 LTV1Q96GA3 475 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 CCDC43Q96MW1 224 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 TMEM237Q96Q45 408 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ZCWPW1Q9H0M4 648 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 CYP39A1Q9NYL5 469 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 STOML1Q9UBI4 398 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 TMEM94Q12767 1356 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ZCCHC11Q5TAX3 1644 aaKnown RBP9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ADGRB3O60242 1522 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
SHPRH-208ENST00000520752 EIF3FO00303 357 aaPredicted RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 LSM1O15116 133 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 SPTLC2O15270 562 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 ECE2O60344 883 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 DIAPH1O60610 1272 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 MTRF1O75570 445 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 WISP1O95388 367 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 PARNO95453 639 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CTSBP07858 339 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 EIF3BP55884 814 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CDK17Q00537 523 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 NSUN2Q08J23 767 aaKnown RBP eCLIP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 KCNMA1Q12791 1236 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 MTF1Q14872 753 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 NDUFA5Q16718 116 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 TRIM68Q6AZZ1 485 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CCDC174Q6PII3 467 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 ASRGL1Q7L266 308 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 GDAP1Q8TB36 358 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 PBKQ96KB5 322 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 RHOVQ96L33 236 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 XPO6Q96QU8 1125 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 UIMC1Q96RL1 719 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 CCDC86Q9H6F5 360 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 PARVBQ9HBI1 364 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 SAMSN1Q9NSI8 373 aaKnown RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 TTC7AQ9ULT0 858 aaPredicted RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 RABL2BQ9UNT1 228 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 EFR3BQ9Y2G0 817 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 EPN1Q9Y6I3 576 aaPredicted RBP9.3□□□□□ -0.92
SHPRH-208ENST00000520752 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
SHPRH-208ENST00000520752 A0A0J9YVX5 310 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 KANSL1LA0AUZ9 987 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
SHPRH-208ENST00000520752 MATN2O00339 956 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 PPP6R2O75170 966 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 SUPT3HO75486 399 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 TJP3O95049 919 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
SHPRH-208ENST00000520752 TMOD1P28289 359 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 VHLP40337 213 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 SYKP43405 635 aa9.29□□□□□ -0.92
SHPRH-208ENST00000520752 TUBP50607 506 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms