RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 CHMP4BP1P59074 171 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 CDC42EP1Q00587 391 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 STRN3Q13033 797 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 NR1I3Q14994 352 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 AMHR2Q16671 573 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 GDF6Q6KF10 455 aaPredicted RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 TAF2Q6P1X5 1199 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 ZPBP2Q6X784 338 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 FRMD5Q7Z6J6 570 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 SERINC5Q86VE9 423 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 ZNF710Q8N1W2 664 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 SLC43A3Q8NBI5 491 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 ARRDC4Q8NCT1 418 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 BORCS6Q96GS4 357 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 FBXL18Q96ME1 805 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 FDXACB1Q9BRP7 624 aaPredicted RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 CBWD1Q9BRT8 395 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 TUBGCP2Q9BSJ2 902 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 ADAMTS10Q9H324 1103 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 HSPBP1Q9NZL4 362 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 OGDHLQ9ULD0 1010 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ESPNB1AK53 854 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 DNM1LO00429 736 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ACKR2O00590 384 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ABLIM1O14639 778 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 PROZP22891 400 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 PSMC2P35998 433 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 MTIF2P46199 727 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 LIG4P49917 911 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 CYP2J2P51589 502 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 NLRP11P59045 1033 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 ITGA7Q13683 1181 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 MAPK6Q16659 721 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 MAN2A1Q16706 1144 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 CCDC40Q4G0X9 1142 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ARMCX5Q6P1M9 558 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 TMC6Q7Z403 805 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 SRGAP1Q7Z6B7 1085 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 VSTM4Q8IW00 320 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 NME8Q8N427 588 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 XXYLT1Q8NBI6 393 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ZSWIM2Q8NEG5 633 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 DNAJB3Q8WWF6 145 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ZNF668Q96K58 619 aaPredicted RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 GLT1D1Q96MS3 346 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ACO2Q99798 780 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 TARS2Q9BW92 718 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 MRPL4Q9BYD3 311 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 HAPLN2Q9GZV7 340 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 FAM49AQ9H0Q0 323 aaPredicted RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 PRMT7Q9NVM4 692 aaPredicted RBP9.31□□□□□ -0.92
VAPB-206ENST00000520497 TAB2Q9NYJ8 693 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 ZKSCAN5Q9Y2L8 839 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 SCN1AP35498 2009 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
VAPB-206ENST00000520497 A0A0B4J269 797 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 A0A0U1RQG5 324 aaPredicted RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 INO80B-WBP1J3KQ70 363 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 N4BP3O15049 544 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 KIAA0391O15091 583 aaKnown RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 TEX33O43247 280 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 B4GALT5O43286 388 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 FAM189A1O60320 539 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 TOM1L1O75674 476 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 RPLP2P05387 115 aaKnown RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 EPB41P11171 864 aaKnown RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.922e-8■□□□□ 10.1
VAPB-206ENST00000520497 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
VAPB-206ENST00000520497 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 TRIM14Q14142 442 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
VAPB-206ENST00000520497 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 FKBP15Q5T1M5 1219 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 SLFN12LQ6IEE8 588 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 TSHZ1Q6ZSZ6 1077 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 UBE2Q1Q7Z7E8 422 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 CCDC112Q8NEF3 446 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 NLRP7Q8WX94 980 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 POMGNT1Q8WZA1 660 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 WNT8BQ93098 351 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 SLC35C1Q96A29 364 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 BICD1Q96G01 975 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 PPP1R16BQ96T49 567 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 NOC4LQ9BVI4 516 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms