RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 LRSAM1Q6UWE0 723 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 MS4A5Q9H3V2 200 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 ZFP69BQ9UJL9 534 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 KDRP35968 1356 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 ANKRD26Q9UPS8 1709 aa8.93□□□□□ -0.98
SDCBP-208ENST00000520228 hCG_2014768A0A024R1R8 64 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 FFAR3O14843 346 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 U2AF1L5P0DN76 240 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 ECE1P42892 770 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 GLRBP48167 497 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 SESN3P58005 492 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 U2AF1Q01081 240 aaKnown RBP eCLIP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 R3HDM1Q15032 1099 aaKnown RBP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 PKN1Q16512 942 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 NECAB2Q7Z6G3 386 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 RASSF3Q86WH2 238 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 ZNF526Q8TF50 670 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 ERCC4Q92889 916 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 E2F7Q96AV8 911 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-208ENST00000520228 MAML3Q96JK9 1138 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 BTBD2Q9BX70 525 aa8.92□□□□□ -0.98
SDCBP-208ENST00000520228 UBA6A0AVT1 1052 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-208ENST00000520228 KNG1P01042 644 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 CHGBP05060 677 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 RPL13P26373 211 aaKnown RBP8.91□□□□□ -0.98
SDCBP-208ENST00000520228 MLLT6P55198 1093 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-208ENST00000520228 IL13RA1P78552 427 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 KANK2Q63ZY3 851 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 STPG3Q8N7X2 389 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 PIGBQ92521 554 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 TACO1Q9BSH4 297 aaKnown RBP8.91□□□□□ -0.98
SDCBP-208ENST00000520228 ZDHHC5Q9C0B5 715 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 VTA1Q9NP79 307 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 TMOD3Q9NYL9 352 aa8.91□□□□□ -0.98
SDCBP-208ENST00000520228 USP36Q9P275 1121 aaKnown RBP8.91□□□□□ -0.98
SDCBP-208ENST00000520228 COL3A1P02461 1466 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-208ENST00000520228 LCHNA4D1U4 455 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 K7ESF4 209 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 PRKD3O94806 890 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 ZNF28P17035 718 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 AFF3P51826 1226 aaKnown RBP8.9□□□□□ -0.98
SDCBP-208ENST00000520228 IGBP1P78318 339 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 MOGSQ13724 837 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 MTHFSDQ2M296 383 aaKnown RBP8.9□□□□□ -0.98
SDCBP-208ENST00000520228 TTC38Q5R3I4 469 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 KANSL1Q7Z3B3 1105 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 PHYKPLQ8IUZ5 450 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 TP53I13Q8NBR0 393 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-208ENST00000520228 ZCCHC14Q8WYQ9 949 aaKnown RBP8.9□□□□□ -0.98
SDCBP-208ENST00000520228 OR10A5Q9H207 317 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 SEMA4AQ9H3S1 761 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 STK32BQ9NY57 414 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 SLC5A4Q9NY91 659 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 CROTQ9UKG9 612 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 RGPD1P0DJD0 1748 aa8.9□□□□□ -0.98
SDCBP-208ENST00000520228 MAP2P11137 1827 aaKnown RBP8.89□□□□□ -0.99
SDCBP-208ENST00000520228 WNK3Q9BYP7 1800 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
SDCBP-208ENST00000520228 MAFO75444 373 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-208ENST00000520228 CYP7B1O75881 506 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 PRKAR2BP31323 418 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 SLC6A3Q01959 620 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 FRMD7Q6ZUT3 714 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 CXXC5Q7LFL8 322 aaKnown RBP8.89□□□□□ -0.99
SDCBP-208ENST00000520228 COG1Q8WTW3 980 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 TRIM8Q9BZR9 551 aa8.89□□□□□ -0.99
SDCBP-208ENST00000520228 CCNL1Q9UK58 526 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-208ENST00000520228 ALG1L2C9J202 215 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 FBXO21O94952 628 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 RGS3P49796 1198 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 ANAPC15P60006 121 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 ROM1Q03395 351 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 FAPQ12884 760 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 IQSEC1Q6DN90 963 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 DPP8Q6V1X1 898 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-208ENST00000520228 C7orf31Q8N865 590 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 LINC01356Q8N9X3 169 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 PHACTR3Q96KR7 559 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 TUBGCP5Q96RT8 1024 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 PUS7LQ9H0K6 701 aaKnown RBP8.88□□□□□ -0.99
SDCBP-208ENST00000520228 PRKRIP1Q9H875 184 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-208ENST00000520228 TOPORSQ9NS56 1045 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-208ENST00000520228 MSRAQ9UJ68 235 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
SDCBP-208ENST00000520228 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
SDCBP-208ENST00000520228 PALLDQ8WX93 1383 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 RGPD2P0DJD1 1756 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
SDCBP-208ENST00000520228 KLHL18O94889 574 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 HMGB2P26583 209 aaKnown RBP8.87□□□□□ -0.99
SDCBP-208ENST00000520228 GUCY2FP51841 1108 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 ERVK-21P61565 698 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 PDCD1Q15116 288 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 SLC15A2Q16348 729 aa8.87□□□□□ -0.99
SDCBP-208ENST00000520228 SLFN12LQ6IEE8 588 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms