RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SCLT1Q96NL6 688 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 MTMR9Q96QG7 549 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 TLE6Q9H808 572 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 FAM105AQ9NUU6 356 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 PRKAG3Q9UGI9 489 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 INPP5FQ9Y2H2 1132 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 COL4A3BPQ9Y5P4 624 aa9.68□□□□□ -0.86
PABPC1-213ENST00000519848 CCDC194A0A1B0GVG4 234 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 ZC3H11AO75152 810 aaKnown RBP eCLIP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 SLITRK3O94933 977 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 GALTP07902 379 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 YWHABP31946 246 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 TECP42680 631 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 QARSP47897 775 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 UBE3AQ05086 875 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 LAMTOR4Q0VGL1 99 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 C8orf34Q49A92 452 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 TMEM184AQ6ZMB5 413 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 FERMT3Q86UX7 667 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 DIS3L2Q8IYB7 885 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 RNF168Q8IYW5 571 aaPredicted RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 GSTCDQ8NEC7 633 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 SLC22A17Q8WUG5 538 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 RABGGTAQ92696 567 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 B3GALT6Q96L58 329 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 HSD17B14Q9BPX1 270 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 EIF2AK1Q9BQI3 630 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
PABPC1-213ENST00000519848 POLD4Q9HCU8 107 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 LZTS1Q9Y250 596 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 PCDHB12Q9Y5F1 795 aa9.67□□□□□ -0.86
PABPC1-213ENST00000519848 DOCK6Q96HP0 2047 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 C2CD4DB7Z1M9 353 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 WIPF1O43516 503 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 LILRB3O75022 631 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 N4BP1O75113 896 aaKnown RBP9.66□□□□□ -0.86
PABPC1-213ENST00000519848 MED24O75448 989 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 MYBP10242 640 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 GLRA2P23416 452 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 MBTD1Q05BQ5 628 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 EPHA7Q15375 998 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PTPN14Q15678 1187 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
PABPC1-213ENST00000519848 GALNT17Q6IS24 598 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 ZNF410Q86VK4 478 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 MRPL43Q8N983 215 aaKnown RBP9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PIGOQ8TEQ8 1089 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 TNPO1Q92973 898 aaKnown RBP9.66□□□□□ -0.86
PABPC1-213ENST00000519848 IGSF21Q96ID5 467 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 FBXL18Q96ME1 805 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 FAM20AQ96MK3 541 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PAAF1Q9BRP4 392 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 GCOM2Q9BZD3 368 aaPredicted RBP9.66□□□□□ -0.86
PABPC1-213ENST00000519848 GBP3Q9H0R5 595 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 ENTPD7Q9NQZ7 604 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 SPG21Q9NZD8 308 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 TCEAL9Q9UHQ7 104 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 PCDHB2Q9Y5E7 798 aa9.66□□□□□ -0.86
PABPC1-213ENST00000519848 DOCK8Q8NF50 2099 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 ASGR2P07307 311 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 GCFC2P16383 781 aaKnown RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 ARF4P18085 180 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 TMOD1P28289 359 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 KRT2P35908 639 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 MLH1P40692 756 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 RARRES1P49788 294 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 POLGP54098 1239 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 ANAPC15P60006 121 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 NHLH1Q02575 133 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 DSC1Q08554 894 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 XKR9Q5GH70 373 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 TWF2Q6IBS0 349 aaKnown RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 CCDC83Q8IWF9 413 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 VPS52Q8N1B4 723 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 RNF149Q8NC42 400 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 MICAL1Q8TDZ2 1067 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 KIFC3Q9BVG8 833 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 PHF7Q9BWX1 381 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-213ENST00000519848 IPPQ9Y573 584 aa9.65□□□□□ -0.86
PABPC1-213ENST00000519848 TRIP11Q15643 1979 aa9.64□□□□□ -0.87
PABPC1-213ENST00000519848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
PABPC1-213ENST00000519848 PP2D1A8MPX8 630 aa9.64□□□□□ -0.87
PABPC1-213ENST00000519848 TBX3O15119 743 aa9.64□□□□□ -0.87
PABPC1-213ENST00000519848 INPPL1O15357 1258 aa9.64□□□□□ -0.87
PABPC1-213ENST00000519848 USO1O60763 962 aaKnown RBP9.64□□□□□ -0.87
PABPC1-213ENST00000519848 ZNF623O75123 536 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms