RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 KIAA1024Q9UPX6 916 aa23.53■■□□□ 1.36
ARFGEF1-206ENST00000519436 USP15Q9Y4E8 981 aaPredicted RBP23.53■■□□□ 1.36
ARFGEF1-206ENST00000519436 IRAK3Q9Y616 596 aa23.53■■□□□ 1.36
ARFGEF1-206ENST00000519436 C5orf42Q9H799 3197 aa23.53■■□□□ 1.36
ARFGEF1-206ENST00000519436 ARHGEF35A5YM69 484 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 LRRIQ4A6NIV6 560 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 CXCL14O95715 111 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 POMCP01189 267 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 ALDH2P05091 517 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 PRPHP41219 470 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 ANKRD54Q6NXT1 300 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 CDR2LQ86X02 465 aaPredicted RBP23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 GSTCDQ8NEC7 633 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 GAD1Q99259 594 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 TMEM175Q9BSA9 504 aa23.52■■□□□ 1.36
ARFGEF1-206ENST00000519436 ARL5CA6NH57 179 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 TTLL13PA6NNM8 815 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 GPR37L1O60883 481 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 CLASP2O75122 1294 aaKnown RBP23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 CTSAP10619 480 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 RILPL1Q5EBL4 403 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 MCTP1Q6DN14 999 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 COLGALT2Q8IYK4 626 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 PRIMPOLQ96LW4 560 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 LRFN3Q9BTN0 628 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 MMTAG2Q9BU76 263 aaKnown RBP23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 BHMT2Q9H2M3 363 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 NXF3Q9H4D5 531 aaKnown RBP23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 POLD4Q9HCU8 107 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 PRMT7Q9NVM4 692 aaPredicted RBP23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 GIT1Q9Y2X7 761 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 STK24Q9Y6E0 443 aa23.51■■□□□ 1.35
ARFGEF1-206ENST00000519436 PP2D1A8MPX8 630 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 NRP1O14786 923 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 COL9A1P20849 921 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 DSC1Q08554 894 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 SLC27A1Q6PCB7 646 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 SNX29Q8TEQ0 813 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 AUTS2Q8WXX7 1259 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 ZFP42Q96MM3 310 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 CCDC113Q9H0I3 377 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 DDX19AQ9NUU7 478 aaKnown RBP23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 FAN1Q9Y2M0 1017 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 HCFC2Q9Y5Z7 792 aa23.5■■□□□ 1.35
ARFGEF1-206ENST00000519436 LILRB3O75022 631 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 EFEMP2O95967 443 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 CDC25AP30304 524 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 MLH1P40692 756 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 NAMPTP43490 491 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 ATP2C1P98194 919 aaPredicted RBP23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 LLGL2Q6P1M3 1020 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 DTHD1Q6ZMT9 781 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 POP1Q99575 1024 aaKnown RBP23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 RAB34Q9BZG1 259 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 C2orf40Q9H1Z8 148 aa23.49■■□□□ 1.35
ARFGEF1-206ENST00000519436 LOC730098B7Z3J9 87 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 ACKR2O00590 384 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 NPTXRO95502 500 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 EDN1P05305 212 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 HOXB8P17481 243 aaPredicted RBP23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 AKAP5P24588 427 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 GIT2Q14161 759 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 BMS1Q14692 1282 aaKnown RBP23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 CBX2Q14781 532 aaPredicted RBP23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 ZBTB8OSQ8IWT0 167 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 FAM193BQ96PV7 902 aaPredicted RBP23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 MARCH5Q9NX47 278 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 SMC3Q9UQE7 1217 aa23.48■■□□□ 1.35
ARFGEF1-206ENST00000519436 E9PMD0 336 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 SRGAP2BP0DMP2 458 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 ALADP13716 330 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 SCNN1GP51170 649 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 PTPN14Q15678 1187 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 TMEM31Q5JXX7 168 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 KRT79Q5XKE5 535 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 DAW1Q8N136 415 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 SLC22A17Q8WUG5 538 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 CASP10Q92851 521 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 APOL6Q9BWW8 343 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 PHF7Q9BWX1 381 aaPredicted RBP23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 TRIM6Q9C030 488 aaPredicted RBP23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 PDZD7Q9H5P4 517 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 DNM3Q9UQ16 869 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 USP20Q9Y2K6 914 aa23.47■■□□□ 1.35
ARFGEF1-206ENST00000519436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 H3BQV1 296 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 DCXO43602 365 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 CUL4AQ13619 759 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 PPP2R5AQ15172 486 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 MAPK6Q16659 721 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 HYIQ5T013 277 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 KCNK18Q7Z418 384 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 RNF135Q8IUD6 432 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 HACE1Q8IYU2 909 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 RNF168Q8IYW5 571 aaPredicted RBP23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 KIFAP3Q92845 792 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 KIFC3Q9BVG8 833 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 STK39Q9UEW8 545 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 RAPGEFL1Q9UHV5 662 aa23.46■■□□□ 1.35
ARFGEF1-206ENST00000519436 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms