RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ADAM15	Q13444	863 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	CABP7	Q86V35	215 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	HSCB	Q8IWL3	235 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	TMEM87A	Q8NBN3	555 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	RASSF8	Q8NHQ8	419 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	MMTAG2	Q9BU76	263 aa	Known RBP	26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	NRDE2	Q9H7Z3	1164 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	PLXNA4	Q9HCM2	1894 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	MEIS3P2	A8K0S8	358 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	B4GALT5	O43286	388 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	NPTXR	O95502	500 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	ALDH2	P05091	517 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	SSB	P05455	408 aa	Known RBP eCLIP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	ERVFC1	P60507	584 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	GIT2	Q14161	759 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	SF3A1	Q15459	793 aa	Known RBP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	PLPP4	Q5VZY2	271 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	RBM23	Q86U06	439 aa	Known RBP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	BSND	Q8WZ55	320 aa		26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	RBM19	Q9Y4C8	960 aa	Known RBP	26.67	■■□□□ 1.86
CNOT7-204	ENST00000518885	ARL5C	A6NH57	179 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	INPPL1	O15357	1258 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	HSP90AA1	P07900	732 aa	Known RBP	26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	GALT	P07902	379 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	GUCY2C	P25092	1073 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	RINT1	Q6NUQ1	792 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	ADGRD2	Q7Z7M1	963 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	IGSF21	Q96ID5	467 aa		26.66	■■□□□ 1.86
CNOT7-204	ENST00000518885	GRXCR2	A6NFK2	248 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	CCDC169	A6NNP5	214 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885		K7ERI5	159 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	POMC	P01189	267 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	LIG1	P18858	919 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	DUSP6	Q16828	381 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	DCAF4L1	Q3SXM0	396 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	DDX53	Q86TM3	631 aa	Known RBP	26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	SYT2	Q8N9I0	419 aa	Predicted RBP	26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	RPS6KC1	Q96S38	1066 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	APOL6	Q9BWW8	343 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	CCDC113	Q9H0I3	377 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	CD207	Q9UJ71	328 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	FAN1	Q9Y2M0	1017 aa		26.65	■■□□□ 1.86
CNOT7-204	ENST00000518885	NT5C1B-RDH14	C9J2C7	533 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	HIP1R	O75146	1068 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	CA8	P35219	290 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	MLH1	P40692	756 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	SMTN	P53814	917 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	PEX3	P56589	373 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	C1orf186	Q6ZWK4	172 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	GAD1	Q99259	594 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	NXF3	Q9H4D5	531 aa	Known RBP	26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	KMT5A	Q9NQR1	393 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	PRKAG3	Q9UGI9	489 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	PARP2	Q9UGN5	583 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	HES2	Q9Y543	173 aa		26.64	■■□□□ 1.86
CNOT7-204	ENST00000518885	TTC28	Q96AY4	2481 aa		26.64	■■□□□ 1.85
CNOT7-204	ENST00000518885	PLA2G4B	P0C869	781 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	GTF2F1	P35269	517 aa	Known RBP eCLIP	26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	LTBR	P36941	435 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	SLC11A1	P49279	550 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	TMEM119	Q4V9L6	283 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	PNMA5	Q96PV4	448 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	RUSC1	Q9BVN2	902 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	PDZD7	Q9H5P4	517 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	DNAJB4	Q9UDY4	337 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885	ATG2A	Q2TAZ0	1938 aa		26.63	■■□□□ 1.85
CNOT7-204	ENST00000518885		H0YCG3	227 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	STX6	O43752	255 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	TXLNA	P40222	546 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	NPTX2	P47972	431 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	SMAD4	Q13485	552 aa	Known RBP	26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	KCNK18	Q7Z418	384 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	ZNF280B	Q86YH2	543 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	VPS52	Q8N1B4	723 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	MRPL43	Q8N983	215 aa	Known RBP	26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	POP1	Q99575	1024 aa	Known RBP	26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	RNF39	Q9H2S5	420 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	TMEM134	Q9H6X4	195 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	FOXD4L1	Q9NU39	408 aa		26.62	■■□□□ 1.85
CNOT7-204	ENST00000518885	PER2	O15055	1255 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	LINC01565	O15544	149 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	TBX10	O75333	385 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	SCP2	P22307	547 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	SCNN1G	P51170	649 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	GRIK3	Q13003	919 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	COASY	Q13057	564 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	REST	Q13127	1097 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	ATF7IP2	Q5U623	682 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	CDR2L	Q86X02	465 aa	Predicted RBP	26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	PLIN2	Q99541	437 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	KIFC3	Q9BVG8	833 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	LARS	Q9P2J5	1176 aa	Known RBP	26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	SSX2IP	Q9Y2D8	614 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	PCDHGC5	Q9Y5F6	944 aa		26.61	■■□□□ 1.85
CNOT7-204	ENST00000518885	DDHD2	O94830	711 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	CXCL14	O95715	111 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	AKAP5	P24588	427 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	OR1G1	P47890	313 aa		26.6	■■□□□ 1.85

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms