RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
TMEM55A-202ENST00000518359 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
TMEM55A-202ENST00000518359 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
TMEM55A-202ENST00000518359 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
TMEM55A-202ENST00000518359 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
TMEM55A-202ENST00000518359 GAS2O43903 313 aaKnown RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 MYBP10242 640 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 GLULP15104 373 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 NCLP19338 710 aaKnown RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 FSHRP23945 695 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 USP11P51784 963 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 SPATA31D4Q6ZUB0 917 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 COLGALT2Q8IYK4 626 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 RTKNQ9BST9 563 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
TMEM55A-202ENST00000518359 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 TGM5O43548 720 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 ITGA4P13612 1032 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 CDC27P30260 824 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 AFF1P51825 1210 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 FGD1P98174 961 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 PFKPQ01813 784 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 RSPO2Q6UXX9 243 aaPredicted RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 SH2D3AQ9BRG2 576 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 COLEC11Q9BWP8 271 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 IFT122Q9HBG6 1241 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 FNIP2Q9P278 1114 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
TMEM55A-202ENST00000518359 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 NCAM2O15394 837 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 LRRN2O75325 713 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 ZMYND10O75800 440 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 PSMD10O75832 226 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 ERLIN2O94905 339 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 EFEMP2O95967 443 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 GPC5P78333 572 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 DSC1Q08554 894 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 USP41Q3LFD5 358 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 LIN9Q5TKA1 542 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 PSPC1Q8WXF1 523 aaKnown RBP13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 FGF14Q92915 247 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 CHST7Q9NS84 486 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 GMEB2Q9UKD1 530 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 USP18Q9UMW8 372 aa13.08□□□□□ -0.32
TMEM55A-202ENST00000518359 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 ARL5CA6NH57 179 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 FAM170BA6NMN3 283 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 ADAMTS3O15072 1205 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 STBD1O95210 358 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 MLH1P40692 756 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 PSMC5P62195 406 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 Q4G0T1 1027 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 SLC44A4Q53GD3 710 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 ZBTB41Q5SVQ8 909 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
TMEM55A-202ENST00000518359 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms