RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 RAD54LQ92698 747 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 HLA-CQ95604 372 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 NXF3Q9H4D5 531 aaKnown RBP20.58■□□□□ 0.89
FAM49B-208ENST00000518344 C17orf75Q9HAS0 396 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 BLOC1S4Q9NUP1 217 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 SPG21Q9NZD8 308 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 KCND2Q9NZV8 630 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
FAM49B-208ENST00000518344 CCDC39Q9UFE4 941 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 COG5Q9UP83 839 aa20.58■□□□□ 0.89
FAM49B-208ENST00000518344 RALGAPA2Q2PPJ7 1873 aa20.58■□□□□ 0.88
FAM49B-208ENST00000518344 FNDC1Q4ZHG4 1894 aaPredicted RBP20.58■□□□□ 0.88
FAM49B-208ENST00000518344 NLRC5Q86WI3 1866 aa20.58■□□□□ 0.88
FAM49B-208ENST00000518344 PRRC2BQ5JSZ5 2229 aaKnown RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 N4BP3O15049 544 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 SLC16A4O15374 487 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 EDN1P05305 212 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 KRT18P05783 430 aaKnown RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 AKAP5P24588 427 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 IRS1P35568 1242 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 TXLNAP40222 546 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 AFF1P51825 1210 aaKnown RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 MRPS5P82675 430 aaKnown RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 KRT17Q04695 432 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 UBE3AQ05086 875 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 LINC00301Q8NCQ3 95 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 FAM193BQ96PV7 902 aaPredicted RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 GAD1Q99259 594 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 PDZD7Q9H5P4 517 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 NRDE2Q9H7Z3 1164 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 KANSL3Q9P2N6 904 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 PARP2Q9UGN5 583 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 PUF60Q9UHX1 559 aaKnown RBP20.57■□□□□ 0.88
FAM49B-208ENST00000518344 TRANK1O15050 2925 aa20.57■□□□□ 0.88
FAM49B-208ENST00000518344 SPTLC2O15270 562 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 PLS3P13797 630 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 DDIT3P35638 169 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 PPM1AP35813 382 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 PLCB3Q01970 1234 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 RRAGBQ5VZM2 374 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 EP400NLQ6ZTU2 488 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 ZNF280BQ86YH2 543 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 ADPGKQ9BRR6 497 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 PANK2Q9BZ23 570 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 IGFLR1Q9H665 355 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 KCNG1Q9UIX4 513 aa20.56■□□□□ 0.88
FAM49B-208ENST00000518344 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
FAM49B-208ENST00000518344 ARL5CA6NH57 179 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 DDHD2O94830 711 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 MLH1P40692 756 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 SMTNP53814 917 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 ATF7IP2Q5U623 682 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 EEF1DP3Q658K8 133 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 SLC39A11Q8N1S5 342 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 SPIRE2Q8WWL2 714 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 MRPS27Q92552 414 aaKnown RBP20.55■□□□□ 0.88
FAM49B-208ENST00000518344 LARP4BQ92615 738 aaKnown RBP20.55■□□□□ 0.88
FAM49B-208ENST00000518344 ZFP42Q96MM3 310 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 ASB2Q96Q27 587 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 TMEM134Q9H6X4 195 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 KLK14Q9P0G3 267 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 DNAJB4Q9UDY4 337 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 GIT1Q9Y2X7 761 aa20.55■□□□□ 0.88
FAM49B-208ENST00000518344 MORC2Q9Y6X9 1032 aaPredicted RBP20.55■□□□□ 0.88
FAM49B-208ENST00000518344 GALTP07902 379 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 SCNN1GP51170 649 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 ERVFC1P60507 584 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 AAK1Q2M2I8 961 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 TJAP1Q5JTD0 557 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 PPP2R3CQ969Q6 453 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 NTPCRQ9BSD7 190 aaKnown RBP20.54■□□□□ 0.88
FAM49B-208ENST00000518344 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 UBE2ZQ9H832 354 aaPredicted RBP20.54■□□□□ 0.88
FAM49B-208ENST00000518344 MIOSQ9NXC5 875 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 SNTG2Q9NY99 539 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 ARHGAP28Q9P2N2 729 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 ODF2LQ9ULJ1 636 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 LZTS1Q9Y250 596 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 PCDHGC5Q9Y5F6 944 aa20.54■□□□□ 0.88
FAM49B-208ENST00000518344 PHLPP2Q6ZVD8 1323 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 KIAA1671Q9BY89 1806 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 SPTBN5Q9NRC6 3674 aaKnown RBP20.53■□□□□ 0.88
FAM49B-208ENST00000518344 PPP6R2O75170 966 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 FAM13AO94988 1023 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 YEATS4O95619 227 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 ALDH2P05091 517 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 HYAL1Q12794 435 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 STRN3Q13033 797 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 GIT2Q14161 759 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 ADGRD2Q7Z7M1 963 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 RBM23Q86U06 439 aaKnown RBP20.53■□□□□ 0.88
FAM49B-208ENST00000518344 MYCT1Q8N699 235 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
FAM49B-208ENST00000518344 ENTPD7Q9NQZ7 604 aa20.53■□□□□ 0.88
FAM49B-208ENST00000518344 LARSQ9P2J5 1176 aaKnown RBP20.53■□□□□ 0.88
FAM49B-208ENST00000518344 PRUNE2Q8WUY3 3088 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms