RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 KCTD10Q9H3F6 313 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 RGS18Q9NS28 235 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 EXOC1Q9NV70 894 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 PIN4Q9Y237 131 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 KIAA1671Q9BY89 1806 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 K7ERI5 159 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 BIN1O00499 593 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.33
AP3B1-203ENST00000517940 PFKMP08237 780 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 SMTNP53814 917 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 FAM189BP81408 668 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 ZCWPW2Q504Y3 356 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 ZBTB41Q5SVQ8 909 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 CEP120Q8N960 986 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 APBB2Q92870 758 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 ADAM2Q99965 735 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 TRAIPQ9BWF2 469 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 CDT1Q9H211 546 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
AP3B1-203ENST00000517940 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 TRANK1O15050 2925 aa12.99□□□□□ -0.33
AP3B1-203ENST00000517940 REV3LO60673 3130 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 BMP8BP34820 402 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 PMS1P54277 932 aaKnown RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 PCBP1Q15365 356 aaKnown RBP eCLIP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 PSRC1Q6PGN9 363 aaPredicted RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 MRPL4Q9BYD3 311 aaKnown RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
AP3B1-203ENST00000517940 MAPK8IP1Q9UQF2 711 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 HES2Q9Y543 173 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 STYXL1Q9Y6J8 313 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 CITO14578 2027 aa12.98□□□□□ -0.33
AP3B1-203ENST00000517940 UBE4BO95155 1302 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ABHD14A-ACY1A0A1B0GW23 586 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ERLIN2O94905 339 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 FGBP02675 491 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 AXLP30530 894 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 PRCPP42785 496 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 GATMP50440 423 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
AP3B1-203ENST00000517940 WNT7BP56706 349 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 MCL1Q07820 350 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 PSMD2Q13200 908 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ATF7IP2Q5U623 682 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
AP3B1-203ENST00000517940 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 FAM105AQ9NUU6 356 aa12.97□□□□□ -0.33
AP3B1-203ENST00000517940 A0A0B4J269 797 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 A0A0U1RQF3 1178 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 TOM1L1O75674 476 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 SMC2O95347 1197 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 NPTXRO95502 500 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 ALCAMQ13740 583 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 IKBKEQ14164 716 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 CLLU1OSQ5K130 101 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.33
AP3B1-203ENST00000517940 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
AP3B1-203ENST00000517940 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 TMEM130Q8N3G9 435 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.33
AP3B1-203ENST00000517940 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 LPPQ93052 612 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 CCDC51Q96ER9 411 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 ACCSQ96QU6 501 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 IPPQ9Y573 584 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
AP3B1-203ENST00000517940 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
AP3B1-203ENST00000517940 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
AP3B1-203ENST00000517940 H0YCG3 227 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms