RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 UBA1P22314 1058 aaKnown RBP11.66□□□□□ -0.54
SPIDR-204ENST00000517824 TNNT3P45378 269 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-204ENST00000517824 TM4SF4P48230 202 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 GCLMP48507 274 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 MFAP3P55082 362 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CCNA1P78396 465 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CBX1P83916 185 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CFAP221Q4G0U5 840 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CBWD6Q4V339 395 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CBWD3Q5JTY5 395 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CBWD5Q5RIA9 395 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 ALKBH5Q6P6C2 394 aaKnown RBP11.66□□□□□ -0.54
SPIDR-204ENST00000517824 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 GPD1LQ8N335 351 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 TMEM161BQ8NDZ6 487 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-204ENST00000517824 CCDC127Q96BQ5 260 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 OPTNQ96CV9 577 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 SAAL1Q96ER3 474 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 BORCS6Q96GS4 357 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 NT5C1BQ96P26 610 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 FNBP1Q96RU3 617 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 KIFC3Q9BVG8 833 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 SELENOOQ9BVL4 669 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 MROH8Q9H579 483 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 RNF14Q9UBS8 474 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 PPME1Q9Y570 386 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 DUSP10Q9Y6W6 482 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 ANK1P16157 1881 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 IRF6O14896 467 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 ZNF862O60290 1169 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 SRGAP2O75044 1071 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 GGPS1O95749 300 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 TGFB3P10600 412 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 GTF2H1P32780 548 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 NAMPTP43490 491 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 DNA2P51530 1060 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 C2orf54Q08AI8 447 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 BRDTQ58F21 947 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 KRT39Q6A163 491 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 SLFN12LQ6IEE8 588 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 CC2D1AQ6P1N0 951 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 GJB7Q6PEY0 223 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 ZNF571Q7Z3V5 609 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 ZBTB8OSQ8IWT0 167 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 RUBCNQ92622 972 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 GLG1Q92896 1179 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 CLMNQ96JQ2 1002 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 JPH2Q9BR39 696 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 TMEM8AQ9HCN3 771 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 UBE2TQ9NPD8 197 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-204ENST00000517824 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
SPIDR-204ENST00000517824 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-204ENST00000517824 TARSL2A2RTX5 802 aaKnown RBP11.64□□□□□ -0.55
SPIDR-204ENST00000517824 GRID2IPA4D2P6 1211 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 ZNF233A6NK53 670 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 TMCO5BA8MYB1 307 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 TISP43B9A030 160 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 GAS2O43903 313 aaKnown RBP11.64□□□□□ -0.55
SPIDR-204ENST00000517824 FTCDO95954 541 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 PNMA6AP0CW24 399 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-204ENST00000517824 KLRC1P26715 233 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 CNGA1P29973 690 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 PIK3CAP42336 1068 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 PDE6CP51160 858 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 TNNC1P63316 161 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 ENPEPQ07075 957 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 WDR44Q5JSH3 913 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 C8orf74Q6P047 294 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 METTL7BQ6UX53 244 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 HDXQ7Z353 690 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 PEX26Q7Z412 305 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 PPM1KQ8N3J5 372 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
SPIDR-204ENST00000517824 MMS19Q96T76 1030 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 R3HDMLQ9H3Y0 253 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 CITO14578 2027 aa11.64□□□□□ -0.55
SPIDR-204ENST00000517824 NCANO14594 1321 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 SYNGAP1Q96PV0 1343 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 LOC102724159A0A0B4J2E5 919 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 ASB14A6NK59 587 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 K7ERI5 159 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 GPR25O00155 361 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 NCK2O43639 380 aa11.63□□□□□ -0.55
SPIDR-204ENST00000517824 EXTL3O43909 919 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms