RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 CROCCP2Q86T23 111 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
PCM1-203ENST00000517545 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CYP3A7-CYP3A51PA0A087WV96 503 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 EML1O00423 815 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 MEIS2O14770 477 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CYP3A7P24462 503 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
PCM1-203ENST00000517545 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 SLC17A8Q8NDX2 589 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 ERMNQ8TAM6 284 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 PWWP2AQ96N64 755 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 RXFP1Q9HBX9 757 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 PRKAG3Q9UGI9 489 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 ATP2A2P16615 1042 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 CDCA2Q69YH5 1023 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 MIS18BP1Q6P0N0 1132 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 GBP7Q8N8V2 638 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 UTP4Q969X6 686 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 TGS1Q96RS0 853 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 ACP6Q9NPH0 428 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 MYL7Q01449 175 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 SNX1Q13596 522 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 SLC13A5Q86YT5 568 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 C1orf54Q8WWF1 131 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 CNKSR1Q969H4 720 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 NAP1L4Q99733 375 aaKnown RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 NKX1-2Q9UD57 310 aaPredicted RBP13.28□□□□□ -0.28
PCM1-203ENST00000517545 RABGAP1Q9Y3P9 1069 aa13.28□□□□□ -0.28
PCM1-203ENST00000517545 ENO4A6NNW6 628 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 BRAFP15056 766 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 HSPA6P17066 643 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 KIF22Q14807 665 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 ECHDC2Q86YB7 292 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 ROPN1BQ9BZX4 212 aaPredicted RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 DNAJC18Q9H819 358 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 ROPN1Q9HAT0 212 aaPredicted RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 SBF2Q86WG5 1849 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 PASKQ96RG2 1323 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 CETPP11597 493 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 GBP1P32455 592 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 GPSM2P81274 684 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 CALCOCO2Q13137 446 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 TRIP13Q15645 432 aaPredicted RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 KYNUQ16719 465 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 MIGA2Q7L4E1 593 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.28
PCM1-203ENST00000517545 IFT74Q96LB3 600 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 RUNDC3BQ96NL0 473 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 PCDHB18PQ96TA0 734 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 ETNK1Q9HBU6 452 aa13.27□□□□□ -0.28
PCM1-203ENST00000517545 FAM13AO94988 1023 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 CHRNB2P17787 502 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 ATP11AP98196 1134 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 CLUL1Q15846 466 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 CYP1B1Q16678 543 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 CRYGNQ8WXF5 182 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 EIF2AK1Q9BQI3 630 aaKnown RBP13.27□□□□□ -0.29
PCM1-203ENST00000517545 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.29
PCM1-203ENST00000517545 OLFML3Q9NRN5 406 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
PCM1-203ENST00000517545 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.29
PCM1-203ENST00000517545 MSH4O15457 936 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 UFL1O94874 794 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 GPC5P78333 572 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 DLG4P78352 724 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 IRX1P78414 480 aaPredicted RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 GPATCH4Q5T3I0 446 aaKnown RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 TRMT10CQ7L0Y3 403 aaKnown RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 LMO3Q8TAP4 145 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 KAT5Q92993 513 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 CD101Q93033 1021 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 SERPINB12Q96P63 405 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms