RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 MFSD3Q96ES6 412 aa4.08□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DCLRE1CQ96SD1 692 aaKnown RBP4.08□□□□□ -1.76
RNU6-1088P-201ENST00000516850 TARS2Q9BW92 718 aaKnown RBP4.08□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CYP4F11Q9HBI6 524 aa4.08□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SPON1Q9HCB6 807 aa4.08□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PRAMEF4O60810 478 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 NANOS3P60323 173 aaKnown RBP4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 APBA1Q02410 837 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DDB1Q16531 1140 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PLEKHG4Q58EX7 1191 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LRRC55Q6ZSA7 311 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PDZD4Q76G19 769 aaPredicted RBP4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DOK3Q7L591 496 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 OR14C36Q8NHC7 312 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LEO1Q8WVC0 666 aaPredicted RBP4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 USP7Q93009 1102 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PAWRQ96IZ0 340 aaKnown RBP4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 AGAP2Q99490 1192 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 NDC1Q9BTX1 674 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ENKD1Q9H0I2 346 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PRSS50Q9UI38 385 aa4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.07□□□□□ -1.76
RNU6-1088P-201ENST00000516850 A0A1W2PR48 441 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 FAM83GA6ND36 823 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 B3GALT2O43825 422 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 KDM1AO60341 852 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LTA4HP09960 611 aaKnown RBP4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CLEC2LP0C7M8 214 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 BMP5P22003 454 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MGAT1P26572 445 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MEF2AQ02078 507 aaPredicted RBP4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 UBE3CQ15386 1083 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ATP13A4Q4VNC1 1196 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 BROXQ5VW32 411 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MBNL2Q5VZF2 373 aaKnown RBP4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CCDC62Q6P9F0 684 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 RASSF3Q86WH2 238 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SLC46A2Q9BY10 475 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 KCNH6Q9H252 994 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 TRPM5Q9NZQ8 1165 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 POGKQ9P215 609 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PACSIN3Q9UKS6 424 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PPP2R3BQ9Y5P8 575 aa4.06□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LCHNA4D1U4 455 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 GRXCR1A8MXD5 290 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DIRC3C9JPN6 131 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 RNASET2O00584 256 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SPATA31D3P0C874 917 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 KRT4P19013 534 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ADCYAP1R1P41586 468 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 USP14P54578 494 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MANFP55145 182 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MXRA7P84157 204 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 TAP1Q03518 808 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SEPT7Q16181 437 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DALRD3Q5D0E6 543 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 EFCAB12Q6NXP0 572 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 FAM180AQ6UWF9 173 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SPATA31D4Q6ZUB0 917 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 GDF7Q7Z4P5 450 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 XYLT1Q86Y38 959 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MSL3Q8N5Y2 521 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SUPT20HQ8NEM7 779 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 OR52N2Q8NGI0 321 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SLC5A5Q92911 643 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 FDXACB1Q9BRP7 624 aaPredicted RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LSM14BQ9BX40 385 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 EMC7Q9NPA0 242 aa4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 EVLQ9UI08 416 aaPredicted RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MRPL42Q9Y6G3 142 aaKnown RBP4.05□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 GAGE12BA1L429 117 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 GAGE12HA6NDE8 117 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 B5MCH6 92 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 PHF2O75151 1096 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ULK1O75385 1050 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CFBP00751 764 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 GASTP01350 101 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 HLA-DOAP06340 250 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 RBP3P10745 1247 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MYCLP1P12525 358 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 NR4A1P22736 598 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 APOBEC3AP31941 199 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LGALS4P56470 323 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 UGT8Q16880 541 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 C19orf54Q5BKX5 351 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CT83Q5H943 113 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 DPY19L2P1Q6NXN4 242 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 Q6ZPA2 131 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 RHOUQ7L0Q8 258 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 VRK3Q8IV63 474 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 LCORLQ8N3X6 602 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 SNX33Q8WV41 574 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MYEOVQ96EZ4 313 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 CPEB1Q9BZB8 566 aaKnown RBP4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 MS4A5Q9H3V2 200 aa4.04□□□□□ -1.76
RNU6-1088P-201ENST00000516850 ZNHIT2Q9UHR6 403 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms