RNA–Protein interactions for RNA: ENST00000516226.1

RNU6-397P-201, Transcript of RNA, U6 small nuclear 397, pseudogene, humanhuman

BASIC

Gene RNU6-397P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-397P-201ENST00000516226 CLK3P49761 638 aaKnown RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 NHLH1Q02575 133 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 RBL2Q08999 1139 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 GJC2Q5T442 439 aaPredicted RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 GPR158Q5T848 1215 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 ESPNLQ6ZVH7 1005 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 MICALCLQ6ZW33 695 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 LILRA3Q8N6C8 439 aaPredicted RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 CAGE1Q8TC20 777 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 SRPK1Q96SB4 655 aaKnown RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 SOX7Q9BT81 388 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 MYL10Q9BUA6 226 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 LSM14BQ9BX40 385 aaKnown RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 CPEB1Q9BZB8 566 aaKnown RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 R3HDMLQ9H3Y0 253 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 ZNF768Q9H5H4 540 aaKnown RBP3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 ING3Q9NXR8 418 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 PTCH2Q9Y6C5 1203 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 MYPNQ86TC9 1320 aa3.36□□□□□ -1.87
RNU6-397P-201ENST00000516226 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 NCR1O76036 304 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 APOL3O95236 402 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 LY86O95711 162 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 PTX3P26022 381 aaPredicted RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 DDX6P26196 483 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 CXCR5P32302 372 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 MPP3Q13368 585 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 FAM214AQ32MH5 1076 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 ESRP1Q6NXG1 681 aaKnown RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 PDZD4Q76G19 769 aaPredicted RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 GLB1L2Q8IW92 636 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 HOMEZQ8IX15 550 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 EFHBQ8N7U6 833 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 CPEB3Q8NE35 698 aaKnown RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 PIK3C3Q8NEB9 887 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 FERMT2Q96AC1 680 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 C8orf37Q96NL8 207 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 ELF4Q99607 663 aaPredicted RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 DNAJC7Q99615 494 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 SPATA5L1Q9BVQ7 753 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 IGSF5Q9NSI5 407 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 INTS7Q9NVH2 962 aaKnown RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 ZKSCAN5Q9Y2L8 839 aa3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 EPN1Q9Y6I3 576 aaPredicted RBP3.35□□□□□ -1.87
RNU6-397P-201ENST00000516226 FAM221BA6H8Z2 402 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 MARCH11A6NNE9 402 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 PROB1E7EW31 1015 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 LPXNO60711 386 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 NDUFA10O95299 355 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 ERBB2P04626 1255 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 CASRP41180 1078 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 EPHA10Q5JZY3 1008 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 PIK3R6Q5UE93 754 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 PAPD7Q5XG87 772 aaKnown RBP3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 LMBR1LQ6UX01 489 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 GLCCI1Q86VQ1 547 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 CMTR2Q8IYT2 770 aaKnown RBP3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 SYNPOQ8N3V7 929 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 BOLLQ8N9W6 283 aaKnown RBP3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 SIMC1Q8NDZ2 872 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 CDC5LQ99459 802 aaKnown RBP3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 DUSP26Q9BV47 211 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 POFUT1Q9H488 388 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 TOMM22Q9NS69 142 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 PODXL2Q9NZ53 605 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 ANKFY1Q9P2R3 1169 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 TLK1Q9UKI8 766 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 FPGT-TNNI3KV9GXZ4 949 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 MAST3O60307 1309 aa3.34□□□□□ -1.87
RNU6-397P-201ENST00000516226 A0A1W2PR48 441 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 GAS7O60861 476 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 RFPL3O75679 317 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 DNAJC8O75937 253 aaPredicted RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 FOSP01100 380 aaPredicted RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 GASTP01350 101 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 PFKMP08237 780 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 LTA4HP09960 611 aaKnown RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 EGR2P11161 476 aaPredicted RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 SLC9A1P19634 815 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 GTF2F1P35269 517 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 FAM189BP81408 668 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 OCRLQ01968 901 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 APBA1Q02410 837 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 NHLH2Q02577 135 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 CD69Q07108 199 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 C19orf54Q5BKX5 351 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 ZNF362Q5T0B9 420 aaPredicted RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 EFCAB12Q6NXP0 572 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 FAM98AQ8NCA5 519 aaKnown RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 OR10H5Q8NGA6 315 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 ZFP28Q8NHY6 868 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 FUBP1Q96AE4 644 aaKnown RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 ZMAT4Q9H898 229 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 KMT5AQ9NQR1 393 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 OXSMQ9NWU1 459 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 MAGEC2Q9UBF1 373 aaPredicted RBP3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 NUMBLQ9Y6R0 609 aa3.33□□□□□ -1.88
RNU6-397P-201ENST00000516226 ZNF185O15231 689 aa3.32□□□□□ -1.88
RNU6-397P-201ENST00000516226 PROP1O75360 226 aa3.32□□□□□ -1.88
RNU6-397P-201ENST00000516226 PCDH8O95206 1070 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms