RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 CD72P21854 359 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CD40P25942 277 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ITGB8P26012 769 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TNFRSF8P28908 595 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TIA1P31483 386 aaKnown RBP eCLIP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 THBS4P35443 961 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ADH7P40394 386 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CDKN2AP42771 156 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RPIAP49247 311 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SERPINB8P50452 374 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PDLIM4P50479 330 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GAS1P54826 345 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ELLP55199 621 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RRP1P56182 461 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GSCP56915 257 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GJA9P57773 515 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PROK1P58294 105 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PITX1P78337 314 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 EIF4G2P78344 907 aaKnown RBP eCLIP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SRPK2P78362 688 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DEFB103AP81534 67 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RPL24P83731 157 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SMAD3P84022 425 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MBTD1Q05BQ5 628 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RUNX1T1Q06455 604 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TNK2Q07912 1038 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TMEM62Q0P6H9 643 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SCAPQ12770 1279 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZBTB17Q13105 803 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TDGQ13569 410 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NBR1Q14596 966 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PCOLCEQ15113 449 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NKX1-1Q15270 411 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TRADDQ15628 312 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CRY1Q16526 586 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MAP3K11Q16584 847 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TAF9Q16594 264 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DBN1Q16643 649 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF284Q2VY69 593 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF568Q3ZCX4 644 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 HSF5Q4G112 596 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GXYLT1Q4G148 440 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PABPC1LQ4VXU2 614 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 VWA3BQ502W6 1294 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PAN2Q504Q3 1202 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TCTE1Q5JU00 501 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SLC10A5Q5PT55 438 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CELF3Q5SZQ8 465 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 C10orf91Q5T1B1 145 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TRAPPC3LQ5T215 181 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q5VSD8 79 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ABHD17BQ5VST6 288 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SHEQ5VZ18 495 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ANKS6Q68DC2 871 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SLC9A4Q6AI14 798 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GTF2IRD2BQ6EKJ0 949 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TTBK2Q6IQ55 1244 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ANO7Q6IWH7 933 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PRPF40BQ6NWY9 871 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q6P435 159 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CYB5D1Q6P9G0 228 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FBXL19Q6PCT2 694 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FOXR1Q6PIV2 292 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 C10orf99Q6UWK7 81 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CLEC18BQ6UXF7 455 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RSPO2Q6UXX9 243 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LIPIQ6XZB0 460 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q6ZR03 302 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q6ZR54 194 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q6ZRU5 148 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LINC00696Q6ZRV3 163 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 C9orf47Q6ZRZ4 202 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PAXIP1Q6ZW49 1069 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 STXBP4Q6ZWJ1 553 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TCF24Q7RTU0 167 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 OLIG3Q7RTU3 272 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZC3HAV1Q7Z2W4 902 aaKnown RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 IRF2BP2Q7Z5L9 587 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ADAMTSL2Q86TH1 951 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GTF2IRD2Q86UP8 949 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SATL1Q86VE3 508 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 IQCHQ86VS3 1027 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PARGQ86W56 976 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FAM72BQ86X60 149 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CATSPERDQ86XM0 798 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LYPD6Q86Y78 171 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ERC1Q8IUD2 1116 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TMTC1Q8IUR5 882 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 C1orf210Q8IVY1 113 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 AMOTL1Q8IY63 956 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TRIM22Q8IYM9 498 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ENTHD1Q8IYW4 607 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 STK11IPQ8N1F8 1099 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LINC00528Q8N1L1 170 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MUC20Q8N307 709 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 Q8N377 158 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 C17orf53Q8N3J3 647 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SLC25A45Q8N413 288 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ESX1Q8N693 406 aa-0.6□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LINC00482Q8N8I6 264 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms