RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 MFSD5Q6N075 450 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 LRSAM1Q6UWE0 723 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 APBB2Q92870 758 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 P2RX5Q93086 422 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 ZNF668Q96K58 619 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 CITO14578 2027 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 ABLIM1O14639 778 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 N4BP3O15049 544 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 GHRP10912 638 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 RAG1P15918 1043 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 CYP2C18P33260 490 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 POU5F1Q01860 360 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 PAK1Q13153 545 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 PAK2Q13177 524 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 DSC3Q14574 896 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 HS2ST1Q7LGA3 356 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 ANK1P16157 1881 aa13.12□□□□□ -0.31
PDLIM5-220ENST00000514830 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 A0A0B4J269 797 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 B4GALT5O43286 388 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 CALUO43852 315 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 MCF2P10911 925 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 ITGB8P26012 769 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 ADSSP30520 456 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 LIG4P49917 911 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 MCL1Q07820 350 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 ATF7IP2Q5U623 682 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 MPZL3Q6UWV2 235 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 NELFCDQ8IXH7 590 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 SYCP3Q8IZU3 236 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 NELFBQ8WX92 580 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 SEPT8Q92599 483 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 PPP1R12CQ9BZL4 782 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 PDZD7Q9H5P4 517 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 PRKAG2Q9UGJ0 569 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 MAPK8IP1Q9UQF2 711 aa13.11□□□□□ -0.31
PDLIM5-220ENST00000514830 TTC3P53804 2025 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 IKBKBO14920 756 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 MAPK13O15264 365 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 CD52P31358 61 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 KYAT1Q16773 422 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 C11orf57Q6ZUT1 292 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 C7orf61Q8IZ16 206 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 BICD1Q96G01 975 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 FBXL18Q96ME1 805 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 MED15Q96RN5 788 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 TSG101Q99816 390 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
PDLIM5-220ENST00000514830 CLDN3O15551 220 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 FAM189A1O60320 539 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 ZNF623O75123 536 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 NR3C1P04150 777 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 SKIP12755 728 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 FGFR4P22455 802 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms