RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 LRFN3Q9BTN0 628 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 NXF3Q9H4D5 531 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 STK39Q9UEW8 545 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 LRWD1Q9UFC0 647 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 HCFC2Q9Y5Z7 792 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 NCOR1O75376 2440 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 A0A1B0GUA9 196 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 FAM86C2PA6NEL3 165 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 ARL5CA6NH57 179 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 LOC730098B7Z3J9 87 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CLASP2O75122 1294 aaKnown RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 POMCP01189 267 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CYP11B2P19099 503 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 GJB2P29033 226 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CCT6AP40227 531 aaKnown RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 MLH1P40692 756 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 PRPHP41219 470 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 SCNN1GP51170 649 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 DSC1Q08554 894 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 PTGDRQ13258 359 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 GIT2Q14161 759 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 BMS1Q14692 1282 aaKnown RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CBX2Q14781 532 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 SYCE2Q6PIF2 218 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 ZBTB8OSQ8IWT0 167 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 AUTS2Q8WXX7 1259 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CASP10Q92851 521 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 PHF7Q9BWX1 381 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 RAB34Q9BZG1 259 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 CCDC113Q9H0I3 377 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 C2orf40Q9H1Z8 148 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 FZD8Q9H461 694 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 MARCH5Q9NX47 278 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 GIT1Q9Y2X7 761 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 HES2Q9Y543 173 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
HMGXB3-205ENST00000514469 NRP1O14786 923 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 NPTXRO95502 500 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 CXCL14O95715 111 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 EFEMP2O95967 443 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 CA8P35219 290 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 NAMPTP43490 491 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 MCM2P49736 904 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 IL17AQ16552 155 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 RILPL1Q5EBL4 403 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 HERC4Q5GLZ8 1057 aaPredicted RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 CDR2LQ86X02 465 aaPredicted RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 RNF168Q8IYW5 571 aaPredicted RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 SNX29Q8TEQ0 813 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 ZFP42Q96MM3 310 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 GAD1Q99259 594 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 TRIM6Q9C030 488 aaPredicted RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 RAPGEFL1Q9UHV5 662 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
HMGXB3-205ENST00000514469 MYO7AQ13402 2215 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 PRR33A8MZF0 331 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 N4BP3O15049 544 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 EDN1P05305 212 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 PRKCBP05771 671 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 ATP2C1P98194 919 aaPredicted RBP11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 PPP2R5AQ15172 486 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 MCTP1Q6DN14 999 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 KIFAP3Q92845 792 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 HERC2P3Q9BVR0 1158 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 APOL6Q9BWW8 343 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 DZANK1Q9NVP4 752 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 MIOSQ9NXC5 875 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 MUTYHQ9UIF7 546 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 FAN1Q9Y2M0 1017 aa11.56□□□□□ -0.56
HMGXB3-205ENST00000514469 TRIOO75962 3097 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 E9PMD0 336 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 ACKR2O00590 384 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 LILRB3O75022 631 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 SOD2P04179 222 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 ALDH2P05091 517 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 EPCAMP16422 314 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 AKAP5P24588 427 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 OR1G1P47890 313 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 ITIH3Q06033 890 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms