RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PLS3P13797 630 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 CDC25BP30305 580 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 STAT6P42226 847 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 NPTX2P47972 431 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 RAB27AP51159 221 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 ERVK-21P61565 698 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 MAPK7Q13164 816 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 DMP1Q13316 513 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 GIT2Q14161 759 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 BTG3Q14201 252 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 MAPK6Q16659 721 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 AMHR2Q16671 573 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 NAALADL2Q58DX5 795 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 NOTUMQ6P988 496 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 C11orf57Q6ZUT1 292 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 MRPL10Q7Z7H8 261 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 CMTR2Q8IYT2 770 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 CEP57L1Q8IYX8 460 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 MYCT1Q8N699 235 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 IQUBQ8NA54 791 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 CNNM3Q8NE01 707 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 LRRC15Q8TF66 581 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 PGBD4Q96DM1 585 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 SAMD11Q96NU1 681 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 CDX2Q99626 313 aaPredicted RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 LRRC27Q9C0I9 530 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 DNAJC25Q9H1X3 360 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 KMT5AQ9NQR1 393 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 FAM105AQ9NUU6 356 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 LARSQ9P2J5 1176 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 HOOK1Q9UJC3 728 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 ODF2LQ9ULJ1 636 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 PCDHB2Q9Y5E7 798 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 A0A087X0B3 334 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ESPNB1AK53 854 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 H0YCG3 227 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 PRKCBP05771 671 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 RB1P06400 928 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 SLFN14P0C7P3 912 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ARF4P18085 180 aaPredicted RBP9.14□□□□□ -0.95
CCL28-204ENST00000514421 SCP2P22307 547 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 AMPD3Q01432 767 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 PRPF4BQ13523 1007 aaKnown RBP9.14□□□□□ -0.95
CCL28-204ENST00000514421 E2F4Q16254 413 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 UBXN11Q5T124 520 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 LUZP1Q86V48 1076 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ZSCAN30Q86W11 494 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 TMEM192Q8IY95 271 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ABI1Q8IZP0 508 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 PDILTQ8N807 584 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 RNF169Q8NCN4 708 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ARNTL2Q8WYA1 636 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 RSPH1Q8WYR4 309 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 CPB2Q96IY4 423 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 REEP2Q9BRK0 252 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 TMEM117Q9H0C3 514 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 CUEDC2Q9H467 287 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 PRDM12Q9H4Q4 367 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 CERS4Q9HA82 394 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
CCL28-204ENST00000514421 PARVGQ9HBI0 331 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 UBN1Q9NPG3 1134 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ARHGAP28Q9P2N2 729 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
CCL28-204ENST00000514421 ADGRA3Q8IWK6 1321 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 MYMKA6NI61 221 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 N4BP3O15049 544 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 SLC16A4O15374 487 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 POLR2DO15514 142 aaKnown RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 B4GALT5O43286 388 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 TBCAO75347 108 aaKnown RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 FAM13AO94988 1023 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 ITGA4P13612 1032 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 BMPR1AP36894 532 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 GATMP50440 423 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 ZNF131P52739 623 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 POSTNQ15063 836 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 TMEM132AQ24JP5 1023 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 DPCR1Q3MIW9 517 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 SLC27A1Q6PCB7 646 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 HACE1Q8IYU2 909 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 TMEM161BQ8NDZ6 487 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 DDX12PQ92771 950 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 KCNN1Q92952 543 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 CLP1Q92989 425 aaKnown RBP9.13□□□□□ -0.95
CCL28-204ENST00000514421 MRFAP1L1Q96HT8 127 aa9.13□□□□□ -0.95
CCL28-204ENST00000514421 CASD1Q96PB1 797 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms