RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 NMRK2Q9NPI5 230 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 LZTFL1Q9NQ48 299 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 PDGFCQ9NRA1 345 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 ERAP1Q9NZ08 941 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 A0A0U1RQJ8 604 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 ANO9A1A5B4 782 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 ZNF233A6NK53 670 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 TISP43B9A030 160 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 HNRNPDLO14979 420 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 MAGEB2O15479 319 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 SORBS3O60504 671 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 ZC3H11AO75152 810 aaKnown RBP eCLIP9.09□□□□□ -0.95
RNF4-220ENST00000513578 IGHA2P01877 340 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 PLEKP08567 350 aaPredicted RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 SLC10A3P09131 477 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 TRIM49P0CI25 452 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 TRIM49CP0CI26 452 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 ACTN1P12814 892 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 SOX5P35711 763 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 MAGEA1P43355 309 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 LIG4P49917 911 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 MXI1P50539 228 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 GPC3P51654 580 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 DLG4P78352 724 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 POU5F1Q01860 360 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 KLHL30Q0D2K2 578 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 MAP2K5Q13163 448 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 GRM1Q13255 1194 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 MKRN4PQ13434 485 aaPredicted RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 RAPGEF1Q13905 1077 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 CAPSQ13938 189 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 TFDP1Q14186 410 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 BMS1Q14692 1282 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 PSMD6Q15008 389 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 DUSP28Q4G0W2 176 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 ZNF569Q5MCW4 686 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 CCDC122Q5T0U0 273 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 KRT39Q6A163 491 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 C17orf99Q6UX52 265 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 C15orf39Q6ZRI6 1047 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 SAPCD2Q86UD0 394 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 CBWD2Q8IUF1 395 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 SLC35F6Q8N357 371 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 LINC01465Q8N7H1 131 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 PLEKHO2Q8TD55 490 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 PRPF31Q8WWY3 499 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 ATRIPQ8WXE1 791 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 PSPC1Q8WXF1 523 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 POMGNT1Q8WZA1 660 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 USP6NLQ92738 828 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 HHIPL1Q96JK4 782 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 NAPGQ99747 312 aaPredicted RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 KIFC3Q9BVG8 833 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 IFIH1Q9BYX4 1025 aaKnown RBP9.09□□□□□ -0.95
RNF4-220ENST00000513578 TMEM117Q9H0C3 514 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 TMEM8AQ9HCN3 771 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 DNAJC12Q9UKB3 198 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 INTUQ9ULD6 942 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 MRFAP1Q9Y605 127 aa9.09□□□□□ -0.95
RNF4-220ENST00000513578 A0A0B4J269 797 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 CTAGE9A4FU28 777 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 LRRIQ3A6PVS8 624 aaPredicted RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 F8VZ95 297 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 IGF2BP3O00425 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
RNF4-220ENST00000513578 MSCO60682 206 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 ABL1P00519 1130 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 LGALS2P05162 132 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 PRLRP16471 622 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 AP3M2P53677 418 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 APBA1Q02410 837 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 MKRN3Q13064 507 aaKnown RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 ACVR2BQ13705 512 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 KIF22Q14807 665 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 NAB2Q15742 525 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 TDRD12Q587J7 1177 aaKnown RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 OLFML2BQ68BL8 750 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 VPS36Q86VN1 386 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 ZBTB8OSQ8IWT0 167 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 TRIM58Q8NG06 486 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 COPS5Q92905 334 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 SYT11Q9BT88 431 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 GPR88Q9GZN0 384 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 LACRTQ9GZZ8 138 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 FZD8Q9H461 694 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 CDC23Q9UJX2 597 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 AGO2Q9UKV8 859 aaKnown RBP9.08□□□□□ -0.96
RNF4-220ENST00000513578 Q9Y3F1 56 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms