RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 WNT8AQ9H1J5 351 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 POFUT1Q9H488 388 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 Q9UFV3 132 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 MSRAQ9UJ68 235 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 CDC42EP3Q9UKI2 254 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 PPP2R3BQ9Y5P8 575 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 EID1Q9Y6B2 187 aa5.1□□□□□ -1.59
NUP54-212ENST00000513248 MAST1Q9Y2H9 1570 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 A2ML1A8K2U0 1454 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 PZPP20742 1482 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 SHANK2Q9UPX8 1470 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 PTPRTO14522 1441 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 NCOA1Q15788 1441 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 ERBINQ96RT1 1412 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.09□□□□□ -1.59
NUP54-212ENST00000513248 A0A0A6YYK5 440 aaPredicted RBP5.09□□□□□ -1.59
NUP54-212ENST00000513248 PRSS38A1L453 326 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 BCAR1P56945 870 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 TMPRSS15P98073 1019 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 LARP4Q71RC2 724 aaKnown RBP eCLIP5.09□□□□□ -1.59
NUP54-212ENST00000513248 BMP8AQ7Z5Y6 402 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 CMIPQ8IY22 773 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 ATL2Q8NHH9 583 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 COG1Q8WTW3 980 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 TUBGCP5Q96RT8 1024 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 SOX7Q9BT81 388 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 KIAA1683Q9H0B3 1180 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 PRDM12Q9H4Q4 367 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 SLC5A4Q9NY91 659 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 KCMF1Q9P0J7 381 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 TCAF1Q9Y4C2 921 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 NUMBLQ9Y6R0 609 aa5.09□□□□□ -1.59
NUP54-212ENST00000513248 CEP170BQ9Y4F5 1589 aaPredicted RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 TCOF1Q13428 1488 aaKnown RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 ZNF335Q9H4Z2 1342 aaPredicted RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 KDM1AO60341 852 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 OPHN1O60890 802 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 GPR3P46089 330 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 KRTAP1-1Q07627 177 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 MAP3K12Q12852 859 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 PCOLCEQ15113 449 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 FSCN1Q16658 493 aaKnown RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 RNF151Q2KHN1 245 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 ESPNLQ6ZVH7 1005 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 RTKN2Q8IZC4 609 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 C7orf31Q8N865 590 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 OR5AN1Q8NGI8 311 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 NEIL1Q96FI4 390 aaPredicted RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 WWC2-AS2Q96NR7 200 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 LRRC37BQ96QE4 947 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 LMF1Q96S06 567 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 DEF6Q9H4E7 631 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 TYW1Q9NV66 732 aaKnown RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 DNMT1P26358 1616 aaKnown RBP5.08□□□□□ -1.6
NUP54-212ENST00000513248 MYO3AQ8NEV4 1616 aa5.08□□□□□ -1.6
NUP54-212ENST00000513248 ABCC3O15438 1527 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 NLRP1Q9C000 1473 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 MYPNQ86TC9 1320 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 TRIM75PA6NK02 468 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 ALG1L2C9J202 215 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 FZD9O00144 591 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 MUSKO15146 869 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 ARHGAP6O43182 974 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 SEC24DO94855 1032 aaPredicted RBP5.07□□□□□ -1.6
NUP54-212ENST00000513248 MEOX1P50221 254 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 STAT5BP51692 787 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 EVA1CP58658 441 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 RAC3P60763 192 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 MTMR1Q13613 665 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 AGBL4Q5VU57 503 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 PRAMEF9Q5VWM5 478 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 TIGD7Q6NT04 549 aaPredicted RBP5.07□□□□□ -1.6
NUP54-212ENST00000513248 ZNF585AQ6P3V2 769 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 KCNK18Q7Z418 384 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 CNTD1Q8N815 330 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 MTG2Q9H4K7 406 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 NOC2LQ9Y3T9 749 aaKnown RBP5.07□□□□□ -1.6
NUP54-212ENST00000513248 NR2E1Q9Y466 385 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 EIF2AK4Q9P2K8 1649 aaKnown RBP5.07□□□□□ -1.6
NUP54-212ENST00000513248 UGGT1Q9NYU2 1555 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 ERVK-7P63135 1459 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 PLA2R1Q13018 1463 aa5.07□□□□□ -1.6
NUP54-212ENST00000513248 ANKRD50Q9ULJ7 1429 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 AMHP03971 560 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 NCLP19338 710 aaKnown RBP5.06□□□□□ -1.6
NUP54-212ENST00000513248 ENPP1P22413 925 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 MRE11P49959 708 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 NFYCQ13952 458 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 TRIM25Q14258 630 aaKnown RBP5.06□□□□□ -1.6
NUP54-212ENST00000513248 TBR1Q16650 682 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 CRB2Q5IJ48 1285 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 USP30Q70CQ3 517 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 HDGFL2Q7Z4V5 671 aaPredicted RBP5.06□□□□□ -1.6
NUP54-212ENST00000513248 RSAD2Q8WXG1 361 aa5.06□□□□□ -1.6
NUP54-212ENST00000513248 AHCYL2Q96HN2 611 aaKnown RBP5.06□□□□□ -1.6
NUP54-212ENST00000513248 ACAP3Q96P50 834 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms