RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 USP20Q9Y2K6 914 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 STYXL1Q9Y6J8 313 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 SCN5AQ14524 2016 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 CCDC85CA6NKD9 419 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 TISP43B9A030 160 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 IKBKBO14920 756 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 ARF4P18085 180 aaPredicted RBP13.72□□□□□ -0.21
PDPN-210ENST00000513143 PROZP22891 400 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 AXLP30530 894 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 HOXA11P31270 313 aaPredicted RBP13.72□□□□□ -0.21
PDPN-210ENST00000513143 MYL5Q02045 173 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 LPIN1Q14693 890 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 ATF7IP2Q5U623 682 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 SPATA1Q5VX52 437 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
PDPN-210ENST00000513143 C12orf56Q8IXR9 622 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 ZC3H3Q8IXZ2 948 aaKnown RBP13.72□□□□□ -0.21
PDPN-210ENST00000513143 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 AGO3Q9H9G7 860 aaKnown RBP13.72□□□□□ -0.21
PDPN-210ENST00000513143 CBX8Q9HC52 389 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 PTPRHQ9HD43 1115 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 TNFSF13BQ9Y275 285 aa13.72□□□□□ -0.21
PDPN-210ENST00000513143 UMODL1Q5DID0 1318 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 ABLIM1O14639 778 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 KIAA0355O15063 1070 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 GPR182O15218 404 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 CLIC2O15247 247 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 TOM1L1O75674 476 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
PDPN-210ENST00000513143 GHRP10912 638 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 GARTP22102 1010 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 ADSSP30520 456 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.21
PDPN-210ENST00000513143 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
PDPN-210ENST00000513143 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 GPNMBQ14956 572 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 NCAPHQ15003 741 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 ZBTB45Q96K62 511 aaPredicted RBP13.71□□□□□ -0.21
PDPN-210ENST00000513143 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 ERVK-5Q9HDB9 667 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 DMAC2Q9NW81 257 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 PADI3Q9ULW8 664 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.21
PDPN-210ENST00000513143 TET1Q8NFU7 2136 aa13.71□□□□□ -0.22
PDPN-210ENST00000513143 A0A0B4J269 797 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 SMTNL1A8MU46 457 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 N4BP3O15049 544 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 CLDN3O15551 220 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 TIMP1P01033 207 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 NR3C1P04150 777 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
PDPN-210ENST00000513143 CD52P31358 61 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 CYP2C18P33260 490 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 MCL1Q07820 350 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 ADAM9Q13443 819 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 CSGALNACT2Q8N6G5 542 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
PDPN-210ENST00000513143 CBWD1Q9BRT8 395 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 PDZD7Q9H5P4 517 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 NFE2L3Q9Y4A8 694 aa13.7□□□□□ -0.22
PDPN-210ENST00000513143 BECN2A8MW95 431 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 CETN3O15182 167 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 NBNO60934 754 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 NR2F2P24468 414 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 PAK2Q13177 524 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 TMEM132AQ24JP5 1023 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 EEF1DP3Q658K8 133 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 NOTUMQ6P988 496 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 LRRC55Q6ZSA7 311 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 FAM43BQ6ZT52 329 aaPredicted RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 LUZP1Q86V48 1076 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 NOC3LQ8WTT2 800 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 CCDC51Q96ER9 411 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 TCHPQ9BT92 498 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 SRRTQ9BXP5 876 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 PCIF1Q9H4Z3 704 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms