RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 GAS2L3Q86XJ1 694 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 DHX40Q8IX18 779 aaKnown RBP11.88□□□□□ -0.51
PFDN1-204ENST00000512707 FAM126BQ8IXS8 530 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 USP38Q8NB14 1042 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
PFDN1-204ENST00000512707 ADPGKQ9BRR6 497 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 TCHPQ9BT92 498 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 FZD8Q9H461 694 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 ZMYM2Q9UBW7 1377 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 N4BP3O15049 544 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 GPR182O15218 404 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 SLC16A3O15427 465 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 CLDN3O15551 220 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 EXOC3O60645 756 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 RPS6KA5O75582 802 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 LDHAP00338 332 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 TPM3P06753 285 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 EPB41P11171 864 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 GARTP22102 1010 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 HOXD13P35453 343 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 KYAT1Q16773 422 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 ATF7IP2Q5U623 682 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 NOTUMQ6P988 496 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 FAM43BQ6ZT52 329 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 USP37Q86T82 979 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 C12orf56Q8IXR9 622 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 DIS3LQ8TF46 1054 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 TARS2Q9BW92 718 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
PFDN1-204ENST00000512707 KIAA1586Q9HCI6 787 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 ANKFY1Q9P2R3 1169 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 ATP11BQ9Y2G3 1177 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
PFDN1-204ENST00000512707 CLIC2O15247 247 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TGFB1I1O43294 461 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CD4P01730 458 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CKBP12277 381 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 KRT13P13646 458 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 SELPP16109 830 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 PSMC2P35998 433 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 MRE11P49959 708 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CYP2J2P51589 502 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 RBL2Q08999 1139 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 PAK2Q13177 524 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 ZNF568Q3ZCX4 644 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TRIM60Q495X7 471 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 MPZL3Q6UWV2 235 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 XXYLT1Q8NBI6 393 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 ACO2Q99798 780 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 MKNK1Q9BUB5 465 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 MSTO1Q9BUK6 570 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-204ENST00000512707 TNFSF13BQ9Y275 285 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 EVPLQ92817 2033 aa11.86□□□□□ -0.51
PFDN1-204ENST00000512707 KCNJ18B7U540 433 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 TSPAN1O60635 241 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 SERPINC1P01008 464 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 CLTBP09497 229 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 MTIF2P46199 727 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 TLE2Q04725 743 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 PPP2R3AQ06190 1150 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 KCNJ12Q14500 433 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 NCAPHQ15003 741 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 TRIM71Q2Q1W2 868 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 DCAF4L1Q3SXM0 396 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 FILIP1LQ4L180 1135 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 ZNF618Q5T7W0 954 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 CDKAL1Q5VV42 579 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 SLC27A1Q6PCB7 646 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 LRRC8DQ7L1W4 858 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 FAM186BQ8IYM0 893 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 CNOT6LQ96LI5 555 aaKnown RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-204ENST00000512707 HIPK3Q9H422 1215 aa11.85□□□□□ -0.51
PFDN1-204ENST00000512707 ARMCX3Q9UH62 379 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms