RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 BLOC1S2Q6QNY1 142 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 SMAP1Q8IYB5 467 aaPredicted RBP8.13□□□□□ -1.11
USP46-208ENST00000512656 CCDC148Q8NFR7 591 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 TRAPPC12Q8WVT3 735 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 LINC01599Q8WXQ3 324 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 ZMYND12Q9H0C1 365 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 CD320Q9NPF0 282 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 C1orf112Q9NSG2 853 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 TMEM260Q9NX78 707 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 RAPGEFL1Q9UHV5 662 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 PLAGL2Q9UPG8 496 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 KIAA1024Q9UPX6 916 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 GINS2Q9Y248 185 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 PCDHB7Q9Y5E2 793 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 TTC3P53804 2025 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 TRIOO75962 3097 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 IGLV3-22A0A075B6J6 115 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 FSD2A1L4K1 749 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 PRR33A8MZF0 331 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 FAM86B1E9PN63 330 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 MAGEB2O15479 319 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 PRPF3O43395 683 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 DCXO43602 365 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 FAM86B2P0C5J1 330 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 PSMA5P28066 241 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 TMOD1P28289 359 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 CDC27P30260 824 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 SARSP49591 514 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 CRYBB1P53674 252 aaPredicted RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 UBE3AQ05086 875 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 APOBRQ0VD83 1088 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 HYAL1Q12794 435 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 SPOUT1Q5T280 376 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 LRRC69Q6ZNQ3 347 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 Q6ZUG5 572 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 SLC24A5Q71RS6 500 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 RTN4RL1Q86UN2 441 aaPredicted RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 CCDC60Q8IWA6 550 aaPredicted RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 ADHFE1Q8IWW8 467 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 KIAA0319LQ8IZA0 1049 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 METTL13Q8N6R0 699 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 BRF1Q92994 677 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 ZBTB10Q96DT7 871 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 FAM167AQ96KS9 214 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 JAKMIP1Q96N16 626 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 MAP7D2Q96T17 732 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 MDFIQ99750 246 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 ALG13Q9NP73 1137 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 PCDHB12Q9Y5F1 795 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 PCDHA10Q9Y5I2 948 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 MRPL42Q9Y6G3 142 aaKnown RBP8.12□□□□□ -1.11
USP46-208ENST00000512656 RALGAPA2Q2PPJ7 1873 aa8.12□□□□□ -1.11
USP46-208ENST00000512656 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 ELOA3DA6NLF2 546 aaPredicted RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 WDR64B1ANS9 1081 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 RBAK-RBAKDNI3L0D1 243 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ADAM23O75077 832 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 SIN3BO75182 1162 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 REC8O95072 547 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ITGB1P05556 798 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 IBSPP21815 317 aaPredicted RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 CIITAP33076 1130 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 LTBRP36941 435 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 NDUFV1P49821 464 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ZP2Q05996 745 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 SMAD4Q13485 552 aaKnown RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 TMEM266Q2M3C6 531 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ELOA3BQ3SY89 546 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 PRR16Q569H4 304 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 FBXL16Q8N461 479 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ELOA3Q8NG57 546 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 CRYGNQ8WXF5 182 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 KCNB2Q92953 911 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ADAM2Q99965 735 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 C22orf23Q9BZE7 217 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 TMX1Q9H3N1 280 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 SUV39H2Q9H5I1 410 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ATP6V0A4Q9HBG4 840 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ERVK-5Q9HDB9 667 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 SH3GLB2Q9NR46 395 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 RGS18Q9NS28 235 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 NRBP2Q9NSY0 501 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 CD207Q9UJ71 328 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 ST3GAL5Q9UNP4 418 aa8.11□□□□□ -1.11
USP46-208ENST00000512656 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
USP46-208ENST00000512656 NID2Q14112 1375 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms