RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SUGT1Q9Y2Z0 365 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 NUB1Q9Y5A7 615 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 SPATA31A1Q5TZJ5 1347 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 GPC4O75487 556 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 YWHABP31946 246 aaKnown RBP8.59□□□□□ -1.03
NEK1-208ENST00000512193 ACOT2P49753 483 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 GABPAQ06546 454 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 PDIA2Q13087 525 aaKnown RBP8.59□□□□□ -1.03
NEK1-208ENST00000512193 NT5DC1Q5TFE4 455 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 ZBED8Q8IZ13 594 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
NEK1-208ENST00000512193 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
NEK1-208ENST00000512193 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
NEK1-208ENST00000512193 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
NEK1-208ENST00000512193 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 TBX3O15119 743 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SLC16A3O15427 465 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 MED24O75448 989 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 LUC7L3O95232 432 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 COMTP21964 271 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 GARSP41250 739 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 TMPRSS15P98073 1019 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 NFIAQ12857 509 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MTM1Q13496 603 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 LONRF1Q17RB8 773 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SUPT20HL1Q3ZLR7 823 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 DPP9Q86TI2 863 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 JAMLQ86YT9 394 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 TRIM42Q8IWZ5 723 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 NLRP7Q8WX94 980 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 DCPSQ96C86 337 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 CRAMP1Q96RY5 1269 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 WRNIP1Q96S55 665 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 TRIM55Q9BYV6 548 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 POLR3FQ9H1D9 316 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 KLC4Q9NSK0 619 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 RBAKQ9NYW8 714 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 HERC5Q9UII4 1024 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 AGO2Q9UKV8 859 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 PCDHA10Q9Y5I2 948 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SLIT1O75093 1534 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 PITPNM2Q9BZ72 1349 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 IQANK1A0A1B0GTG1 560 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 CHN1P15882 459 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 RFX1P22670 979 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SMARCA1P28370 1054 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SFNP31947 248 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 NPEPPSP55786 919 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SMAD1Q15797 465 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 SH2D4BQ5SQS7 431 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MAP3K21Q5TCX8 1036 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 PPM1NQ8N819 430 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 HIPK4Q8NE63 616 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MCUQ8NE86 351 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MDM1Q8TC05 714 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 CASKIN2Q8WXE0 1202 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 LRRC37BQ96QE4 947 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 CYTH2Q99418 400 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 DDX23Q9BUQ8 820 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 ALG13Q9NP73 1137 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 IL17RBQ9NRM6 502 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 ZNF446Q9NWS9 450 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEK1-208ENST00000512193 KIF20BQ96Q89 1820 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 ZSCAN5CA6NGD5 496 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 KRT37O76014 449 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 GSTA1P08263 222 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 GSTA2P09210 222 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 ABCD1P33897 745 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 PSMC1P62191 440 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 CAV1Q03135 178 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 STXBP2Q15833 593 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 NBPF9Q3BBW0 867 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MUM1L1Q5H9M0 696 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 FIGNQ5HY92 759 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 PLA2G4FQ68DD2 849 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 LRRC31Q6UY01 552 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SYT2Q8N9I0 419 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 KIAA0895Q8NCT3 520 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 RUBCNQ92622 972 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 MTMR8Q96EF0 704 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 SNF8Q96H20 258 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 FAM49AQ9H0Q0 323 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 BCAP29Q9UHQ4 241 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
NEK1-208ENST00000512193 UBE4BO95155 1302 aa8.58□□□□□ -1.04
NEK1-208ENST00000512193 COPEO14579 308 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SMIM24O75264 130 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 MDM2Q00987 491 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 SURF1Q15526 300 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 KYNUQ16719 465 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ZNF568Q3ZCX4 644 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms