RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 AGMOQ6ZNB7 445 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 MTSS1LQ765P7 747 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 ZCCHC14Q8WYQ9 949 aaKnown RBP10.34□□□□□ -0.75
NUP54-211ENST00000512151 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 PHF20Q9BVI0 1012 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 PLEKHA4Q9H4M7 779 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 DPP7Q9UHL4 492 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 PRG3Q9Y2Y8 225 aaPredicted RBP10.34□□□□□ -0.75
NUP54-211ENST00000512151 ITPR1Q14643 2758 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 MYH9P35579 1960 aaKnown RBP10.33□□□□□ -0.76
NUP54-211ENST00000512151 IGSF10Q6WRI0 2623 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 AXIN1O15169 862 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
NUP54-211ENST00000512151 DSG1Q02413 1049 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 DRP2Q13474 957 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 TWF2Q6IBS0 349 aaKnown RBP10.33□□□□□ -0.76
NUP54-211ENST00000512151 ELMSAN1Q6PJG2 1045 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 CKAP2LQ8IYA6 745 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 CCDC136Q96JN2 1154 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 MAP7D2Q96T17 732 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 TMEM175Q9BSA9 504 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 SPZ1Q9BXG8 430 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 ARRDC1-AS1Q9H2J1 176 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 CHST12Q9NRB3 414 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 FAM105AQ9NUU6 356 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 C2orf42Q9NWW7 574 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 MAFBQ9Y5Q3 323 aaPredicted RBP10.33□□□□□ -0.76
NUP54-211ENST00000512151 COL4A2P08572 1712 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 NAV2Q8IVL1 2488 aa10.33□□□□□ -0.76
NUP54-211ENST00000512151 SMG1Q96Q15 3661 aaKnown RBP10.33□□□□□ -0.76
NUP54-211ENST00000512151 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 K7ESF4 209 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 MEIS1O00470 390 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 NRG2O14511 850 aaPredicted RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 ATMINO43313 823 aaPredicted RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 FOXD2O60548 495 aaPredicted RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 ZNF623O75123 536 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 POMCP01189 267 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 ALDH2P05091 517 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 ZNF806P0C7X5 589 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 PDE1AP54750 535 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 CEP55Q53EZ4 464 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 HEATR6Q6AI08 1181 aaKnown RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 NPAS3Q8IXF0 933 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 ING5Q8WYH8 240 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 RRP36Q96EU6 259 aaKnown RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 SCLT1Q96NL6 688 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 LMAN1LQ9HAT1 526 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 LY9Q9HBG7 655 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 STK39Q9UEW8 545 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 MRPS17Q9Y2R5 130 aaKnown RBP10.32□□□□□ -0.76
NUP54-211ENST00000512151 ADAMTS20P59510 1910 aa10.32□□□□□ -0.76
NUP54-211ENST00000512151 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 SPAG17Q6Q759 2223 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 CCL16O15467 120 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 MAGEB2O15479 319 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 PLEKHA8P1O95397 391 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 SDSP20132 328 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 KIF5BP33176 963 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 CXCL12P48061 93 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 NOVA1P51513 510 aaKnown RBP10.31□□□□□ -0.76
NUP54-211ENST00000512151 CCR3P51677 355 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 ZNF252P-AS1Q0IIN9 211 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
NUP54-211ENST00000512151 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 MIS18BP1Q6P0N0 1132 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 COLGALT2Q8IYK4 626 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 CMTR1Q8N1G2 835 aaKnown RBP10.31□□□□□ -0.76
NUP54-211ENST00000512151 C12orf50Q8NA57 414 aaPredicted RBP10.31□□□□□ -0.76
NUP54-211ENST00000512151 MBOAT7Q96N66 472 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 PIN4Q9Y237 131 aaKnown RBP10.31□□□□□ -0.76
NUP54-211ENST00000512151 SSX2IPQ9Y2D8 614 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 WDR81Q562E7 1941 aa10.31□□□□□ -0.76
NUP54-211ENST00000512151 IFIT3O14879 490 aaKnown RBP10.3□□□□□ -0.76
NUP54-211ENST00000512151 ZNF862O60290 1169 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 OR1G1P47890 313 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 RBM25P49756 843 aaKnown RBP10.3□□□□□ -0.76
NUP54-211ENST00000512151 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 TANGO2Q6ICL3 276 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 TCEAL6Q6IPX3 200 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 CEP68Q76N32 757 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 MRPL10Q7Z7H8 261 aaKnown RBP10.3□□□□□ -0.76
NUP54-211ENST00000512151 LONP2Q86WA8 852 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 SKAP1Q86WV1 359 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 SRBD1Q8N5C6 995 aaKnown RBP10.3□□□□□ -0.76
NUP54-211ENST00000512151 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 TCEAL3Q969E4 200 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 FAM193BQ96PV7 902 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms