RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 RSAD1Q9HA92 442 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF4-216ENST00000511859 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 MTF2Q9Y483 593 aaPredicted RBP13.02□□□□□ -0.33
RNF4-216ENST00000511859 TGM5O43548 720 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 LRP3O75074 770 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 MYBP10242 640 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 FSHRP23945 695 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 NRLP54845 237 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 PRKCEQ02156 737 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 DRP2Q13474 957 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 LILRA6Q6PI73 481 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 PARM1Q6UWI2 310 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
RNF4-216ENST00000511859 NIFKQ9BYG3 293 aaKnown RBP13.01□□□□□ -0.33
RNF4-216ENST00000511859 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
RNF4-216ENST00000511859 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 CDH7Q9ULB5 785 aa13.01□□□□□ -0.33
RNF4-216ENST00000511859 IGKV6-21A0A0C4DH24 114 aa13□□□□□ -0.33
RNF4-216ENST00000511859 NR1I2O75469 434 aa13□□□□□ -0.33
RNF4-216ENST00000511859 ZMYND10O75800 440 aa13□□□□□ -0.33
RNF4-216ENST00000511859 POMCP01189 267 aa13□□□□□ -0.33
RNF4-216ENST00000511859 SFNP31947 248 aa13□□□□□ -0.33
RNF4-216ENST00000511859 AFF1P51825 1210 aaKnown RBP13□□□□□ -0.33
RNF4-216ENST00000511859 JAKMIP3Q5VZ66 844 aa13□□□□□ -0.33
RNF4-216ENST00000511859 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
RNF4-216ENST00000511859 RHPN2Q8IUC4 686 aa13□□□□□ -0.33
RNF4-216ENST00000511859 COLGALT2Q8IYK4 626 aa13□□□□□ -0.33
RNF4-216ENST00000511859 CELF5Q8N6W0 485 aaKnown RBP13□□□□□ -0.33
RNF4-216ENST00000511859 CNNM3Q8NE01 707 aa13□□□□□ -0.33
RNF4-216ENST00000511859 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
RNF4-216ENST00000511859 MARCH5Q9NX47 278 aa13□□□□□ -0.33
RNF4-216ENST00000511859 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
RNF4-216ENST00000511859 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
RNF4-216ENST00000511859 ANKRD11Q6UB99 2663 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 FOXD2O60548 495 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 CHMLP26374 656 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 CIITAP33076 1130 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 OR1G1P47890 313 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 JAK3P52333 1124 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 CREMQ03060 361 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 DMWDQ09019 674 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 SPEM2Q0P670 501 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 PRR16Q569H4 304 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 LAIR1Q6GTX8 287 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 MICU3Q86XE3 530 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 RAB11FIP4Q86YS3 637 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 ST13P5Q8NFI4 369 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
RNF4-216ENST00000511859 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 PRG3Q9Y2Y8 225 aaPredicted RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 TDRD15B5MCY1 1934 aaKnown RBP12.99□□□□□ -0.33
RNF4-216ENST00000511859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 SGSM2O43147 1006 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 RETP07949 1114 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 CD72P21854 359 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 FUT2Q10981 343 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 USP41Q3LFD5 358 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 TSSK4Q6SA08 328 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 ZNF852Q6ZMS4 543 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 FGF13Q92913 245 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 MBOAT7Q96N66 472 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 RIT2Q99578 217 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 COLEC11Q9BWP8 271 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 RBM8AQ9Y5S9 174 aaKnown RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
RNF4-216ENST00000511859 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 CEP295Q9C0D2 2601 aa12.98□□□□□ -0.33
RNF4-216ENST00000511859 NEFLP07196 543 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 HNRNPA1P09651 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
RNF4-216ENST00000511859 DSC1Q08554 894 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 FZD5Q13467 585 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 UGCGQ16739 394 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 SRGAP1Q7Z6B7 1085 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 RDM1Q8NG50 284 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 NLRP4Q96MN2 994 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 ZMYND12Q9H0C1 365 aa12.97□□□□□ -0.33
RNF4-216ENST00000511859 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms