RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RECQL4O94761 1208 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 LY86O95711 162 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 PFKMP08237 780 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 HK1P19367 917 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 MAKP20794 623 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 SCNN1GP51170 649 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 SESN3P58005 492 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 TGFB2P61812 414 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 EXOSC10Q01780 885 aaKnown RBP4.33□□□□□ -1.72
CHD1-207ENST00000511628 UGT8Q16880 541 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 ZBTB41Q5SVQ8 909 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 Q6ZRM9 215 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 RASSF3Q86WH2 238 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 Q8N1X5 172 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 ZNF483Q8TF39 744 aaPredicted RBP4.33□□□□□ -1.72
CHD1-207ENST00000511628 NEU4Q8WWR8 484 aaPredicted RBP4.33□□□□□ -1.72
CHD1-207ENST00000511628 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
CHD1-207ENST00000511628 HAPLN2Q9GZV7 340 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 SLC5A4Q9NY91 659 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 ZBTB21Q9ULJ3 1066 aa4.33□□□□□ -1.72
CHD1-207ENST00000511628 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 ALG1L2C9J202 215 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 MARCH6O60337 910 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 BRINP1O60477 761 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 FAM20BO75063 409 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 RPS6KA4O75676 772 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 PRKD3O94806 890 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 PARNO95453 639 aaKnown RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 ACVRL1P37023 503 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 CASRP41180 1078 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 FAM214AQ32MH5 1076 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 CT83Q5H943 113 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 ODR4Q5SWX8 454 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 RNF219Q5W0B1 726 aaPredicted RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 IQSEC1Q6DN90 963 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 APBB1IPQ7Z5R6 666 aaPredicted RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 FAM83AQ86UY5 434 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 SPATS2Q86XZ4 545 aaKnown RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 SYNE4Q8N205 404 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 GLB1L3Q8NCI6 653 aaPredicted RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 PIK3C3Q8NEB9 887 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 CACTINQ8WUQ7 758 aaKnown RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 IL17RAQ96F46 866 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 MNTQ99583 582 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD1-207ENST00000511628 HECAQ9UBI9 543 aaPredicted RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 EIF2B4Q9UI10 523 aaKnown RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 APOBEC2Q9Y235 224 aaKnown RBP4.32□□□□□ -1.72
CHD1-207ENST00000511628 PPP2R3BQ9Y5P8 575 aa4.32□□□□□ -1.72
CHD1-207ENST00000511628 GOLGA8AA7E2F4 631 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PRR5-ARHGAP8B1AHC4 643 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PLSCR1O15162 318 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 STC2O76061 302 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 S100BP04271 92 aaPredicted RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 LPLP06858 475 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 LTA4HP09960 611 aaKnown RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 GYPEP15421 78 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PTGS2P35354 604 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 GZMKP49863 264 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 MANFP55145 182 aaKnown RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 LGALS4P56470 323 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 ADAM8P78325 824 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 KLF10Q13118 480 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PDZD4Q76G19 769 aaPredicted RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 TAS1R1Q7RTX1 841 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 NECAB2Q7Z6G3 386 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 CNTD1Q8N815 330 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 MDGA1Q8NFP4 955 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 CPT1CQ8TCG5 803 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 JDP2Q8WYK2 163 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 CLIP3Q96DZ5 547 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 MTMR8Q96EF0 704 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PAWRQ96IZ0 340 aaKnown RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 ACAP3Q96P50 834 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 SMAD5Q99717 465 aaKnown RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 ZNF703Q9H7S9 590 aaPredicted RBP4.31□□□□□ -1.72
CHD1-207ENST00000511628 NRDE2Q9H7Z3 1164 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 MMRN2Q9H8L6 949 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 SPON1Q9HCB6 807 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 SLC2A4RGQ9NR83 387 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 PRSS50Q9UI38 385 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 TRHDEQ9UKU6 1024 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 SORCS3Q9UPU3 1222 aa4.31□□□□□ -1.72
CHD1-207ENST00000511628 XDHP47989 1333 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 GABRDO14764 452 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 ALDH1L1O75891 902 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 SCAF4O95104 1147 aaKnown RBP4.3□□□□□ -1.72
CHD1-207ENST00000511628 SLPIP03973 132 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 WNT3AP56704 352 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 ITKQ08881 620 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 UBE3CQ15386 1083 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 RABL3Q5HYI8 236 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 CMIPQ8IY22 773 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 CBARPQ8N350 705 aaPredicted RBP4.3□□□□□ -1.72
CHD1-207ENST00000511628 EAF2Q96CJ1 260 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms