RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 IGBP1P78318 339 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PPP2R5CQ13362 524 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 GRM2Q14416 872 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 LPIN1Q14693 890 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 SHROOM1Q2M3G4 852 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 MIIPQ5JXC2 388 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 DENND2CQ68D51 928 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PDXDC2PQ6P474 469 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 ALDH16A1Q8IZ83 802 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 GIPC3Q8TF64 312 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 STMN2Q93045 179 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 LRRC59Q96AG4 307 aaKnown RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PHF12Q96QT6 1004 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 CRAMP1Q96RY5 1269 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 FMO2Q99518 471 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 ECSITQ9BQ95 431 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 TRIM31Q9BZY9 425 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 DDX47Q9H0S4 455 aaKnown RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 STMN4Q9H169 189 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PABPC3Q9H361 631 aaKnown RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PARVBQ9HBI1 364 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 SCHIP1Q9P0W5 487 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 TTC7AQ9ULT0 858 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 FAF1Q9UNN5 650 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-208ENST00000511604 PLAGL2Q9UPG8 496 aa7.82□□□□□ -1.16
CPNE4-208ENST00000511604 CACNA1FO60840 1977 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 SPATA31A3Q5VYP0 1347 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 DDX3XO00571 662 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CBX6O95503 412 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FGFR1OPO95684 399 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CREB1P16220 341 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 EEF1GP26641 437 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CDR2Q01850 454 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 NWD1Q149M9 1564 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 MTFR1Q15390 333 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CYTH1Q15438 398 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ARL13BQ3SXY8 428 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 KCTD21Q4G0X4 260 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TNFAIP8L3Q5GJ75 292 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 MEI1Q5TIA1 1274 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 SNRNP48Q6IEG0 339 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TMTC3Q6ZXV5 915 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CROCCP2Q86T23 111 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 PASD1Q8IV76 773 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CKAP2Q8WWK9 683 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 SKA1Q96BD8 255 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 GRAMD1AQ96CP6 724 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 PRICKLE1Q96MT3 831 aaPredicted RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FNBP1Q96RU3 617 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 MIPEPQ99797 713 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TUBGCP2Q9BSJ2 902 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CEP44Q9C0F1 390 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ZMYND12Q9H0C1 365 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CLK4Q9HAZ1 481 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TELO2Q9Y4R8 837 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 NUMBLQ9Y6R0 609 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 MYH6P13533 1939 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TMEM131LA2VDJ0 1609 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FUOMA2VDF0 154 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CCDC160A6NGH7 325 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FAM196BA6NMK8 535 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FAM47E-STBD1D6RA91 191 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 FBXO21O94952 628 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 RPN1P04843 607 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 PCSK6P29122 969 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 HNRNPH3P31942 346 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 COPB2P35606 906 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TGFBIQ15582 683 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ZNF423Q2M1K9 1284 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 RILPL1Q5EBL4 403 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CCSAPQ6IQ19 270 aaPredicted RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 PHLDB2Q86SQ0 1253 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 KSR1Q8IVT5 923 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ADSSL1Q8N142 457 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CACTIN-AS1Q8N1I8 211 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TRPC4APQ8TEL6 797 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 TGS1Q96RS0 853 aaKnown RBP7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ZSWIM5Q9P217 1185 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 ZNHIT2Q9UHR6 403 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 PPP1R9AQ9ULJ8 1098 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 NR2E1Q9Y466 385 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 SLC4A4Q9Y6R1 1079 aa7.81□□□□□ -1.16
CPNE4-208ENST00000511604 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 A0A1W2PQJ5 194 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TMEM120BA0PK00 339 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 LRRC53A6NM62 1247 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TTC34A8MYJ7 566 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PGM3O95394 542 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 KLRC1P26715 233 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CRABP2P29373 138 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms