RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 EPS8L1Q8TE68 723 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 PSPC1Q8WXF1 523 aaKnown RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 ZKSCAN4Q969J2 545 aaPredicted RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 FAM81BQ96LP2 452 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 MYCBPQ99417 103 aaPredicted RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 UNC45AQ9H3U1 944 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 RABEP2Q9H5N1 569 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 MAP3K20Q9NYL2 800 aaKnown RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 WRAP73Q9P2S5 460 aaPredicted RBP9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 ATP8A1Q9Y2Q0 1164 aa9.94□□□□□ -0.82
PDGFRA-208ENST00000509490 H0YHG0 523 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF76P36508 570 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 SCNN1DP51172 638 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 VAMP7P51809 220 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 STAT2P52630 851 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 NCKAP1LP55160 1127 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ODR4Q5SWX8 454 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 RBM26Q5T8P6 1007 aaKnown RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 CYB5D1Q6P9G0 228 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MAIP1Q8WWC4 291 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 SERPINB12Q96P63 405 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TAOK3Q9H2K8 898 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 USP21Q9UK80 565 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MTUS1Q9ULD2 1270 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNFX1Q9P2E3 1918 aaKnown RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PASKQ96RG2 1323 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TP73O15350 636 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 GAS7O60861 476 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 FTLP02792 175 aaPredicted RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 SHBGP04278 402 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PLS3P13797 630 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 CHN1P15882 459 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PDE6BP35913 854 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 GPC3P51654 580 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 SEL1L2Q5TEA6 688 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MASTLQ96GX5 879 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PLCD4Q9BRC7 762 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MXRA8Q9BRK3 442 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 LRRC4CQ9HCJ2 640 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ACTL7BQ9Y614 415 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 AFF2P51816 1311 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TBC1D12O60347 775 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 HIP1RO75146 1068 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ALADP13716 330 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MNAT1P51948 309 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 JAG1P78504 1218 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 AUHQ13825 339 aaKnown RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 RASA3Q14644 834 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 GALNTL6Q49A17 601 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ODF2Q5BJF6 829 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 RNF187Q5TA31 235 aaPredicted RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TAOK1Q7L7X3 1001 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 DNAAF5Q86Y56 855 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 TPH2Q8IWU9 490 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 ANKS4BQ8N8V4 417 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PIGOQ8TEQ8 1089 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 FBXL18Q96ME1 805 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 C8orf37Q96NL8 207 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 FOXP3Q9BZS1 431 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 BCCIPQ9P287 314 aaKnown RBP eCLIP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 LARSQ9P2J5 1176 aaKnown RBP9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 LGALS13Q9UHV8 139 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 MCM8Q9UJA3 840 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
PDGFRA-208ENST00000509490 EXOC3O60645 756 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ZC3H11AO75152 810 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 COMTP21964 271 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 PPP3CAQ08209 521 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SLC29A2Q14542 456 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SNCBQ16143 134 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CNGA2Q16280 664 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SHROOM1Q2M3G4 852 aaPredicted RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SPRED3Q2MJR0 410 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ENOSF1Q7L5Y1 443 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ARHGEF19Q8IW93 802 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SLC20A1Q8WUM9 679 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 DDX1Q92499 740 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 KRT35Q92764 455 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 GLG1Q92896 1179 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CCDC114Q96M63 670 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 PCDHB18PQ96TA0 734 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 NEU2Q9Y3R4 380 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 EMSYQ7Z589 1322 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ARHGEF35A5YM69 484 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 O00370 1275 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms