RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 FDXACB1Q9BRP7 624 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 NOL10Q9BSC4 688 aaKnown RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 SYBUQ9NX95 663 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 H2AFY2Q9P0M6 372 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 RNF7Q9UBF6 113 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 DKK2Q9UBU2 259 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 EIF2B4Q9UI10 523 aaKnown RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 INSL6Q9Y581 213 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 COL11A2P13942 1736 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 MYADML2A6NDP7 307 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 TMEM200CA6NKL6 621 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 PROB1E7EW31 1015 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 NRP1O14786 923 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 ALDH1A2O94788 518 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 LY86O95711 162 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 PLA2G5P39877 138 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 WNT3AP56704 352 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 TAP1Q03518 808 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 MRPL49Q13405 166 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 LRRC32Q14392 662 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 VPS72Q15906 364 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 PRR16Q569H4 304 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZBTB41Q5SVQ8 909 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 TIGD7Q6NT04 549 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 DOK3Q7L591 496 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 GPRIN1Q7Z2K8 1008 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZZZ3Q8IYH5 903 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 LILRA3Q8N6C8 439 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 FAM98AQ8NCA5 519 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 PMFBP1Q8TBY8 1022 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 SLC46A2Q9BY10 475 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 KCNH6Q9H252 994 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 CHST2Q9Y4C5 530 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 EPN1Q9Y6I3 576 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 SETD1BQ9UPS6 1966 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 MYPNQ86TC9 1320 aa3.37□□□□□ -1.87
DEPDC1B-204ENST00000509006 PPP1R12AO14974 1030 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 MAFGO15525 162 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 TGM5O43548 720 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 DNAJC6O75061 913 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 RFPL3O75679 317 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 NCR1O76036 304 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 APOL3O95236 402 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 F2P00734 622 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 PFKMP08237 780 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 APOBEC3AP31941 199 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 CASRP41180 1078 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 DSG1Q02413 1049 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 FOXI1Q12951 378 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 IQSEC1Q6DN90 963 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 TAS1R1Q7RTX1 841 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 KIF18BQ86Y91 864 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 LCORLQ8N3X6 602 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 MSL3Q8N5Y2 521 aaKnown RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 CDYL2Q8N8U2 506 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 SIMC1Q8NDZ2 872 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZNF496Q96IT1 587 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 CPPED1Q9BRF8 314 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 POLR3GLQ9BT43 218 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 LRFN3Q9BTN0 628 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 NDC1Q9BTX1 674 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 OSBPL2Q9H1P3 480 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 TOMM22Q9NS69 142 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 INTS7Q9NVH2 962 aaKnown RBP3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 TRPM5Q9NZQ8 1165 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 PCDHB6Q9Y5E3 794 aa3.36□□□□□ -1.87
DEPDC1B-204ENST00000509006 A0A1W2PR48 441 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 LEFTY2O00292 366 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 PCDH8O95206 1070 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 C1RP00736 705 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 POU3F2P20265 443 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 FLT3P36888 993 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 AVPR1BP47901 424 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 SEC24CP53992 1094 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 PABPC4Q13310 644 aaKnown RBP eCLIP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 CFAP100Q494V2 611 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 BTNL9Q6UXG8 535 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 MICALCLQ6ZW33 695 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 UBE2R2Q712K3 238 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 HDGFL2Q7Z4V5 671 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 FAM83AQ86UY5 434 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 SYT12Q8IV01 421 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 ARHGEF19Q8IW93 802 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 EFHBQ8N7U6 833 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 GLB1L3Q8NCI6 653 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 LINC00476Q8WZB0 136 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 CAVIN3Q969G5 261 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 IL17RAQ96F46 866 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 SPATA5L1Q9BVQ7 753 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 TMEM260Q9NX78 707 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 USP36Q9P275 1121 aaKnown RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 MAGEC2Q9UBF1 373 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 TMPRSS11EQ9UL52 423 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 KAT6AQ92794 2004 aa3.35□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZSCAN20P17040 1043 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 CD40P25942 277 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 CXCR5P32302 372 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 GPR15P49685 360 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 GZMKP49863 264 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms