RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 DHX38Q92620 1227 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 MTMR8Q96EF0 704 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 SHDQ96IW2 340 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 LLPHQ9BRT6 129 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 TEX13BQ9BXU2 312 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 RNF26Q9BY78 433 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 GLT8D2Q9H1C3 349 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 RANBP17Q9H2T7 1088 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 MAP3K20Q9NYL2 800 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 SEC63Q9UGP8 760 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 TPCN1Q9ULQ1 816 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 NAP1L2Q9ULW6 460 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 PPT2Q9UMR5 302 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ST14Q9Y5Y6 855 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 CAPN6Q9Y6Q1 641 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 PCNTO95613 3336 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 FRMPD2Q68DX3 1309 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ADGRA2Q96PE1 1338 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZBTB5O15062 677 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 PRPF3O43395 683 aaKnown RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 STRNO43815 780 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ICAM1P05362 532 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZNF865P0CJ78 1059 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 GOLGA8HP0CJ92 632 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 CYP2C8P10632 490 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 HOXD10P28358 340 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 MAPK4P31152 587 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 STAT3P40763 770 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 GIPRP48546 466 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 HMGN5P82970 282 aaKnown RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 TNK2Q07912 1038 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 CRHR2Q13324 411 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 KIF22Q14807 665 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ME3Q16798 604 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 C17orf99Q6UX52 265 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 RIOX2Q8IUF8 465 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 SRBD1Q8N5C6 995 aaKnown RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 REPS2Q8NFH8 660 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 GTF3C6Q969F1 213 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 VWCEQ96DN2 955 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 FERD3LQ96RJ6 166 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 MYL10Q9BUA6 226 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 AMNQ9BXJ7 453 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 MROH8Q9H579 483 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 JMJD4Q9H9V9 463 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 SEMA3GQ9NS98 782 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 RBPJLQ9UBG7 517 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZNF214Q9UL59 606 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 KIF3AQ9Y496 699 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 A0A0G2JMZ2 1700 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 DOCK3Q8IZD9 2030 aa6.3□□□□□ -1.4
HMGB1P44-201ENST00000508597 COL11A1P12107 1806 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ABCB11O95342 1321 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 STK36Q9NRP7 1315 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZNFX1Q9P2E3 1918 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CYTH3O43739 400 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 FKTNO75072 461 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 DEXIO95424 95 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 XBP1P17861 261 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 RXRAP19793 462 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLC16A2P36021 539 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 PRMT2P55345 433 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCT2P78371 535 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SP3Q02447 781 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SSRP1Q08945 709 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SCRN1Q12765 414 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 BECN1Q14457 450 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 TMEM132BQ14DG7 1078 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 NTRK3Q16288 839 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CDC37Q16543 378 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCDC81Q6ZN84 652 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 VSIG10LQ86VR7 867 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCAR1Q8IX12 1150 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ABRAQ8N0Z2 381 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 FLCNQ8NFG4 579 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCDC12Q8WUD4 166 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ERO1AQ96HE7 468 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 INTS4Q96HW7 963 aaKnown RBP6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SPATC1LQ9H0A9 340 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 PRDM7Q9NQW5 492 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 SH3GLB2Q9NR46 395 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 FBXO28Q9NVF7 368 aa6.29□□□□□ -1.4
HMGB1P44-201ENST00000508597 ADAMTS6Q9UKP5 1117 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms