RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PUM3Q15397 648 aaKnown RBP5.59□□□□□ -1.51
NUP54-206ENST00000508465 DLGAP5Q15398 846 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 ATP2B3Q16720 1220 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CFAP100Q494V2 611 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CAVIN4Q5BKX8 364 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 C20orf194Q5TEA3 1177 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 IQCEQ6IPM2 695 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 TEX2Q8IWB9 1127 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 PALM2Q8IXS6 379 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 FTSJ3Q8IY81 847 aaKnown RBP5.59□□□□□ -1.51
NUP54-206ENST00000508465 JMYQ8N9B5 988 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 DPF3Q92784 378 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CDCA5Q96FF9 252 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CAPNS2Q96L46 248 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 PRMT6Q96LA8 375 aaPredicted RBP5.59□□□□□ -1.51
NUP54-206ENST00000508465 NEUROD6Q96NK8 337 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CLIC6Q96NY7 704 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 PCED1AQ9H1Q7 454 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 GPRC5CQ9NQ84 441 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 RCAN3Q9UKA8 241 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 PCDHB10Q9UN67 800 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 FZD1Q9UP38 647 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 HDAC5Q9UQL6 1122 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 HS3ST3A1Q9Y663 406 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 CNTNAP1P78357 1384 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 FAM205AQ6ZU69 1335 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 WDR33Q9C0J8 1336 aaKnown RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 RASSF10A6NK89 507 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 GPR42O15529 346 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 CIAO1O76071 339 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 HSPA1AP0DMV8 641 aaKnown RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 HSPA1BP0DMV9 641 aaKnown RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 SLC5A1P13866 664 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 ZNF28P17035 718 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 IL15P40933 162 aaPredicted RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 STAT5AP42229 794 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 PHKA1P46020 1223 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 HUNKP57058 714 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 ATP8B2P98198 1209 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 SCRN1Q12765 414 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 G3BP1Q13283 466 aaKnown RBP eCLIP5.58□□□□□ -1.52
NUP54-206ENST00000508465 CRB2Q5IJ48 1285 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 MFSD14BQ5SR56 506 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 C2orf69Q8N8R5 385 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 C19orf47Q8N9M1 422 aaKnown RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 DNERQ8NFT8 737 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 OR6P1Q8NGX9 317 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 LPIN2Q92539 896 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 COPS5Q92905 334 aa5.58□□□□□ -1.52
NUP54-206ENST00000508465 TDRD3Q9H7E2 651 aaKnown RBP5.58□□□□□ -1.52
NUP54-206ENST00000508465 ADAMTSL1Q8N6G6 1762 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 TCP10L2B9ZVM9 353 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 NOP56O00567 594 aaKnown RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 MUSKO15146 869 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 FOXN1O15353 648 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 SURF6O75683 361 aaKnown RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 KCNH1O95259 989 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 RBM25P49756 843 aaKnown RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 SELENOPP49908 381 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 GTF2A2P52657 109 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 CACNB3P54284 484 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 EPHB4P54760 987 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 OS9Q13438 667 aaPredicted RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 ADAM9Q13443 819 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 CR1LQ2VPA4 569 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 GORABQ5T7V8 394 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 SLFN13Q68D06 897 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 CCDC81Q6ZN84 652 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 RIOX2Q8IUF8 465 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 KBTBD2Q8IY47 623 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 IGDCC4Q8TDY8 1250 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 ZBED3Q96IU2 234 aaPredicted RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 SPATA32Q96LK8 384 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 DEFB129Q9H1M3 183 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 VEZTQ9HBM0 779 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 GBA2Q9HCG7 927 aaPredicted RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 ZNF70Q9UC06 446 aaPredicted RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 FTSJ1Q9UET6 329 aa5.57□□□□□ -1.52
NUP54-206ENST00000508465 TIMM13Q9Y5L4 95 aaPredicted RBP5.57□□□□□ -1.52
NUP54-206ENST00000508465 MYO3BQ8WXR4 1341 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 A0A1B0GUL7 405 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 A0A1W2PQH9 124 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 B4GALT4O60513 344 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 ZNF623O75123 536 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 RPL11P62913 178 aaKnown RBP5.56□□□□□ -1.52
NUP54-206ENST00000508465 FKBP1AP62942 108 aaKnown RBP5.56□□□□□ -1.52
NUP54-206ENST00000508465 MTX1Q13505 466 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 RASA3Q14644 834 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 PPP2R5EQ16537 467 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 ZNF394Q53GI3 561 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 RGMBQ6NW40 437 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 PKN3Q6P5Z2 889 aa5.56□□□□□ -1.52
NUP54-206ENST00000508465 CEP68Q76N32 757 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms