RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 KRT39Q6A163 491 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 SNRNP48Q6IEG0 339 aaKnown RBP13.83□□□□□ -0.2
SMG7-214ENST00000508461 SCARA5Q6ZMJ2 495 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 FAM151AQ8WW52 585 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 VPS37BQ9H9H4 285 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 GDF3Q9NR23 364 aa13.83□□□□□ -0.2
SMG7-214ENST00000508461 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
SMG7-214ENST00000508461 DYNLT1P63172 113 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 TRPC3Q13507 836 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
SMG7-214ENST00000508461 SLC47A2Q86VL8 602 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 KRT35Q92764 455 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 ATP6V0A1Q93050 837 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
SMG7-214ENST00000508461 TTC7AQ9ULT0 858 aaPredicted RBP13.82□□□□□ -0.2
SMG7-214ENST00000508461 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 CLTAP09496 248 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 CYP3A7P24462 503 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 STX2P32856 288 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 MTM1Q13496 603 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 E2F5Q15329 346 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 HYIQ5T013 277 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
SMG7-214ENST00000508461 TMEM270Q6UE05 265 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 PPP1R16BQ96T49 567 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 VAV3Q9UKW4 847 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 FZD1Q9UP38 647 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 STK38LQ9Y2H1 464 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 SPDYE2BA6NHP3 402 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 SPDYE6P0CI01 402 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 MARK3P27448 753 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 MARCKSL1P49006 195 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 SLC29A2Q14542 456 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 SEZ6Q53EL9 994 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
SMG7-214ENST00000508461 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 EDIL3O43854 480 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PLS3P13797 630 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PTGISQ16647 500 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 ACTRT1Q8TDG2 376 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 ERP44Q9BS26 406 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 MKNK1Q9BUB5 465 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 LCA5LO95447 670 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PSMC5P62195 406 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 FBXL13Q8NEE6 735 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 RUBCNQ92622 972 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TBC1D31Q96DN5 1066 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 PSMD10O75832 226 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 GUCY2CP25092 1073 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 CNGA1P29973 690 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 NR2E1Q9Y466 385 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PCDHA2Q9Y5H9 948 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 PI4K2BG5E9Z4 385 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
SMG7-214ENST00000508461 LONRF1Q17RB8 773 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 ARHGAP27Q6ZUM4 889 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 CCDC197Q8NCU1 140 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 MYCBPAPQ8TBZ2 947 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 HOMER3Q9NSC5 361 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 TBC1D22BQ9NU19 505 aa13.81□□□□□ -0.2
SMG7-214ENST00000508461 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
SMG7-214ENST00000508461 CAND2O75155 1236 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 RTN2O75298 545 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 CCDC13Q8IYE1 715 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 TAS1R2Q8TE23 839 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 LENG9Q96B70 501 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 TRPC6Q9Y210 931 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 CCDC88AQ3V6T2 1871 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 IRS2Q9Y4H2 1338 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 SCP2P22307 547 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 HMGCS2P54868 508 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 JPH2Q9BR39 696 aaPredicted RBP13.8□□□□□ -0.2
SMG7-214ENST00000508461 NEUROG2Q9H2A3 272 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 NXF1Q9UBU9 619 aaKnown RBP13.8□□□□□ -0.2
SMG7-214ENST00000508461 K7ERI5 159 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 SRGAP2CP0DJJ0 459 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 ITGB5P18084 799 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms