RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 ALDH7A1P49419 539 aaKnown RBP16.6■□□□□ 0.25
TRIO-211ENST00000508343 BCAR1P56945 870 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 PLCB3Q01970 1234 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
TRIO-211ENST00000508343 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 TCEAL5Q5H9L2 206 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 SPIRE2Q8WWL2 714 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 RAD54LQ92698 747 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
TRIO-211ENST00000508343 HLA-CQ95604 372 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 SPG21Q9NZD8 308 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 PUF60Q9UHX1 559 aaKnown RBP16.6■□□□□ 0.25
TRIO-211ENST00000508343 GIT1Q9Y2X7 761 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 HES2Q9Y543 173 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 KIAA1671Q9BY89 1806 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 PHLPP2Q6ZVD8 1323 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 CARNS1A5YM72 827 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 SPTLC2O15270 562 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 PLS3P13797 630 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 PBX3P40426 434 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
TRIO-211ENST00000508343 SMTNP53814 917 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 MRPS5P82675 430 aaKnown RBP16.59■□□□□ 0.25
TRIO-211ENST00000508343 KRT17Q04695 432 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 DHX8Q14562 1220 aaKnown RBP16.59■□□□□ 0.25
TRIO-211ENST00000508343 MCM6Q14566 821 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
TRIO-211ENST00000508343 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 LZTS1Q9Y250 596 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
TRIO-211ENST00000508343 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 INPPL1O15357 1258 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 NCK2O43639 380 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ZC3H11AO75152 810 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIO-211ENST00000508343 PPP6R2O75170 966 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 CSPG5O95196 566 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 YEATS4O95619 227 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 EDN1P05305 212 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 PKP1Q13835 747 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 NT5DC1Q5TFE4 455 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ATF7IP2Q5U623 682 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 RRAGBQ5VZM2 374 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ATL3Q6DD88 541 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ZNF280BQ86YH2 543 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 SLC39A11Q8N1S5 342 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 MICAL1Q8TDZ2 1067 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 LARP4BQ92615 738 aaKnown RBP16.58■□□□□ 0.24
TRIO-211ENST00000508343 ASB2Q96Q27 587 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 GAD1Q99259 594 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 ADPGKQ9BRR6 497 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.24
TRIO-211ENST00000508343 TLR9Q9NR96 1032 aa16.58■□□□□ 0.24
TRIO-211ENST00000508343 LARSQ9P2J5 1176 aaKnown RBP16.58■□□□□ 0.24
TRIO-211ENST00000508343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 NT5C1B-RDH14C9J2C7 533 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 SLC16A4O15374 487 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 DDHD2O94830 711 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 POMCP01189 267 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 KRT18P05783 430 aaKnown RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 GALTP07902 379 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 AKAP5P24588 427 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 IRS1P35568 1242 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 ERVFC1P60507 584 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 AAK1Q2M2I8 961 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 PDE12Q6L8Q7 609 aaKnown RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 PPP2R3CQ969Q6 453 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 FAM193BQ96PV7 902 aaPredicted RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 REEP2Q9BRK0 252 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
TRIO-211ENST00000508343 GBP3Q9H0R5 595 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 STK17AQ9UEE5 414 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 PARP2Q9UGN5 583 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 TNFSF13BQ9Y275 285 aa16.57■□□□□ 0.24
TRIO-211ENST00000508343 ALDH2P05091 517 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 MLH1P40692 756 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 TFF2Q03403 129 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 GIT2Q14161 759 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 BECN1Q14457 450 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 DCAF4L1Q3SXM0 396 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 TJAP1Q5JTD0 557 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 EEF1DP3Q658K8 133 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 TAS1R3Q7RTX0 852 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
TRIO-211ENST00000508343 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 TMEM169Q96HH4 297 aa16.56■□□□□ 0.24
TRIO-211ENST00000508343 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms