RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 PPM1AP35813 382 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 MLH1P40692 756 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 NRIP1P48552 1158 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 AFF1P51825 1210 aaKnown RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 ERVFC1P60507 584 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 DMP1Q13316 513 aaPredicted RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 PRPF4BQ13523 1007 aaKnown RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 KARSQ15046 597 aaKnown RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 PCBP1Q15365 356 aaKnown RBP eCLIP10.36□□□□□ -0.75
DDX41-209ENST00000508279 CDCA2Q69YH5 1023 aaPredicted RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 RINT1Q6NUQ1 792 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 SLC27A1Q6PCB7 646 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 TMC7Q7Z402 723 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 MRPL10Q7Z7H8 261 aaKnown RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 ZNF280BQ86YH2 543 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 HACE1Q8IYU2 909 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 CNNM3Q8NE01 707 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 CCDC51Q96ER9 411 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 TMEM169Q96HH4 297 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 UHRF1Q96T88 793 aaPredicted RBP10.36□□□□□ -0.75
DDX41-209ENST00000508279 GAD1Q99259 594 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 TCF25Q9BQ70 676 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 NFKBIZQ9BYH8 718 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 TLE6Q9H808 572 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 CNTNAP2Q9UHC6 1331 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 K7ERI5 159 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 N4BP3O15049 544 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 ABCB7O75027 752 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 NDUFV1P49821 464 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 SCNN1GP51170 649 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 UBE3AQ05086 875 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 C1orf186Q6ZWK4 172 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 SLC39A11Q8N1S5 342 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 TMEM87AQ8NBN3 555 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 PABPC5Q96DU9 382 aaKnown RBP10.35□□□□□ -0.75
DDX41-209ENST00000508279 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 AK8Q96MA6 479 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 ZFP42Q96MM3 310 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 ADPGKQ9BRR6 497 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 FZD8Q9H461 694 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 ZHX3Q9H4I2 956 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 PDZD7Q9H5P4 517 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 KMT5AQ9NQR1 393 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 PRG3Q9Y2Y8 225 aaPredicted RBP10.35□□□□□ -0.75
DDX41-209ENST00000508279 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
DDX41-209ENST00000508279 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 ARL5CA6NH57 179 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 ACKR2O00590 384 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 SLC16A4O15374 487 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 NCK2O43639 380 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 B4GALT3O60512 393 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 DDHD2O94830 711 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 EDN1P05305 212 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 KRT18P05783 430 aaKnown RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 GALTP07902 379 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 HARSP12081 509 aaKnown RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 BMP1P13497 986 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 PLCG1P19174 1290 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 LONP1P36776 959 aaKnown RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 OR1G1P47890 313 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 NPTX2P47972 431 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 SLC11A1P49279 550 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 EFNA5P52803 228 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 SLC12A3P55017 1021 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 DLX2Q07687 328 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 MCM6Q14566 821 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 STK38Q15208 465 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 PTPAQ15257 358 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 TMEM119Q4V9L6 283 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 HYIQ5T013 277 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 EEF1DP3Q658K8 133 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 PTCRAQ6ISU1 281 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 LLGL2Q6P1M3 1020 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 GPBP1Q86WP2 473 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 VPS52Q8N1B4 723 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 SYT2Q8N9I0 419 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 AUTS2Q8WXX7 1259 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 EPSTI1Q96J88 318 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 CLIC6Q96NY7 704 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 USP28Q96RU2 1077 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 RPS6KC1Q96S38 1066 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 CCDC113Q9H0I3 377 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 ZSCAN16Q9H4T2 348 aaPredicted RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 UBN1Q9NPG3 1134 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 MIOSQ9NXC5 875 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 SNTG2Q9NY99 539 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 KANSL3Q9P2N6 904 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
DDX41-209ENST00000508279 FAN1Q9Y2M0 1017 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 GDAQ9Y2T3 454 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 CITO14578 2027 aa10.34□□□□□ -0.75
DDX41-209ENST00000508279 VCANP13611 3396 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms