RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SPIRE2Q8WWL2 714 aa21.28■■□□□ 1
LMNA-221ENST00000506981 P2RX5Q93086 422 aa21.28■■□□□ 1
LMNA-221ENST00000506981 SPATA32Q96LK8 384 aa21.28■■□□□ 1
LMNA-221ENST00000506981 PANK2Q9BZ23 570 aa21.28■■□□□ 1
LMNA-221ENST00000506981 ZHX3Q9H4I2 956 aa21.28■■□□□ 1
LMNA-221ENST00000506981 TMEM134Q9H6X4 195 aa21.28■■□□□ 1
LMNA-221ENST00000506981 PARVGQ9HBI0 331 aa21.28■■□□□ 1
LMNA-221ENST00000506981 FAM13BQ9NYF5 915 aa21.28■■□□□ 1
LMNA-221ENST00000506981 LMCD1Q9NZU5 365 aa21.28■■□□□ 1
LMNA-221ENST00000506981 ARHGAP28Q9P2N2 729 aa21.28■■□□□ 1
LMNA-221ENST00000506981 LPXNO60711 386 aa21.27■■□□□ 1
LMNA-221ENST00000506981 LINC00271P0C7V0 271 aa21.27■■□□□ 1
LMNA-221ENST00000506981 POU3F3P20264 500 aaPredicted RBP21.27■■□□□ 1
LMNA-221ENST00000506981 RNASELQ05823 741 aaKnown RBP21.27■■□□□ 1
LMNA-221ENST00000506981 NOMO2Q5JPE7 1267 aa21.27■■□□□ 1
LMNA-221ENST00000506981 MYCT1Q8N699 235 aa21.27■■□□□ 1
LMNA-221ENST00000506981 PPM1EQ8WY54 764 aa21.27■■□□□ 1
LMNA-221ENST00000506981 APOL6Q9BWW8 343 aa21.27■■□□□ 1
LMNA-221ENST00000506981 MRPL4Q9BYD3 311 aaKnown RBP21.27■■□□□ 1
LMNA-221ENST00000506981 PDZD7Q9H5P4 517 aa21.27■■□□□ 1
LMNA-221ENST00000506981 RCOR1Q9UKL0 485 aa21.27■■□□□ 1
LMNA-221ENST00000506981 PCDHA7Q9UN72 937 aa21.27■■□□□ 1
LMNA-221ENST00000506981 MTCH2Q9Y6C9 303 aa21.27■■□□□ 1
LMNA-221ENST00000506981 TRANK1O15050 2925 aa21.27■■□□□ 1
LMNA-221ENST00000506981 GIT2Q14161 759 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 DCAF4L1Q3SXM0 396 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 ATF7IP2Q5U623 682 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 AGMOQ6ZNB7 445 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 THNSL1Q8IYQ7 743 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 COLGALT1Q8NBJ5 622 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 SMG8Q8ND04 991 aaKnown RBP21.26■□□□□ 0.99
LMNA-221ENST00000506981 ZNF558Q96NG5 402 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 LMAN2LQ9H0V9 348 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 CWH43Q9H720 699 aa21.26■□□□□ 0.99
LMNA-221ENST00000506981 CARNS1A5YM72 827 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 MEIS3P2A8K0S8 358 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 K7ENM7 598 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 OFD1O75665 1012 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 SCP2P22307 547 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 PPM1AP35813 382 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 ANP32AP39687 249 aaKnown RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 CCDC85BQ15834 202 aaPredicted RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 AXDND1Q5T1B0 1012 aaPredicted RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 DYMQ7RTS9 669 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 MRPL38Q96DV4 380 aaKnown RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 NTPCRQ9BSD7 190 aaKnown RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 LRRC27Q9C0I9 530 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 CUEDC2Q9H467 287 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
LMNA-221ENST00000506981 KANSL3Q9P2N6 904 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 HCSTQ9UBK5 93 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 HES2Q9Y543 173 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 CDH23Q9H251 3354 aa21.25■□□□□ 0.99
LMNA-221ENST00000506981 ABCD1P33897 745 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 ZNF131P52739 623 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 TIGD5Q53EQ6 642 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 LRRC55Q6ZSA7 311 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 FAM178BQ8IXR5 827 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 IQUBQ8NA54 791 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 KLHL23Q8NBE8 558 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 SLC17A8Q8NDX2 589 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 LEO1Q8WVC0 666 aaPredicted RBP21.24■□□□□ 0.99
LMNA-221ENST00000506981 DDX12PQ92771 950 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 DHX58Q96C10 678 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 FAM193BQ96PV7 902 aaPredicted RBP21.24■□□□□ 0.99
LMNA-221ENST00000506981 PYM1Q9BRP8 204 aaKnown RBP21.24■□□□□ 0.99
LMNA-221ENST00000506981 TBC1D13Q9NVG8 400 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 PARP2Q9UGN5 583 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 GIT1Q9Y2X7 761 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 MYO7AQ13402 2215 aa21.24■□□□□ 0.99
LMNA-221ENST00000506981 ZMYM2Q9UBW7 1377 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 A0A087X0B3 334 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 TTLL13PA6NNM8 815 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 TRAK2O60296 914 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 ZC3H11AO75152 810 aaKnown RBP eCLIP21.23■□□□□ 0.99
LMNA-221ENST00000506981 EDN1P05305 212 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 NCKAP1LP55160 1127 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 ZNF568Q3ZCX4 644 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 NT5DC1Q5TFE4 455 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 KCNT2Q6UVM3 1135 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 TMEM161BQ8NDZ6 487 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 BICD1Q96G01 975 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 RPS6KC1Q96S38 1066 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 ALG13Q9NP73 1137 aaKnown RBP21.23■□□□□ 0.99
LMNA-221ENST00000506981 PLAGL2Q9UPG8 496 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 TNFSF13BQ9Y275 285 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 USP20Q9Y2K6 914 aa21.23■□□□□ 0.99
LMNA-221ENST00000506981 PDCD11Q14690 1871 aaKnown RBP21.23■□□□□ 0.99
LMNA-221ENST00000506981 GRM6O15303 877 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 ITGB1P05556 798 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 MAPTP10636 758 aaKnown RBP21.22■□□□□ 0.99
LMNA-221ENST00000506981 GAP43P17677 238 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 MLH1P40692 756 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 ALDH7A1P49419 539 aaKnown RBP21.22■□□□□ 0.99
LMNA-221ENST00000506981 AMPD3Q01432 767 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 SKIV2LQ15477 1246 aaKnown RBP21.22■□□□□ 0.99
LMNA-221ENST00000506981 RESP18Q5W5W9 173 aa21.22■□□□□ 0.99
LMNA-221ENST00000506981 EEF1DP3Q658K8 133 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms